Non-Coding RNA Search

Ss1.1-Mixc-0027k21.5

Sequence:


               
               GCCATTCGGGCAGCTCCGCGCTATCATGGACCCTGAAGGCGGTGCAGGGGGCCCGGCGGG
CAGCCAACTTCGCCCTGAAGGTGGAGGTGGAGTGCAGCAGCCTGCAGGAGGCTCTGGAGG
CGGCCGAGGCAGGAGCTGACCTTGTCTTGCTGGACAACTTCAGGCCTGAGGAGCTGCACC
CCACGGCCGCGGCGCTGAAGGCTCAGTTCCCGACCGTGGGCGTGGAGGCCAGCGGGGGCG
TCACCCTGGACAACCTCCCTCAGTTCTGTGGGCCCCACATCGATGTCATCTCTCTGGGGA
TGCTAACCCAGGCAGCCCCAGCCCTGGATTTCTCCCTCAAGCTGTTTGCCGAAGGGACCA
CTCCAGTGCCCTACGCGCGCAAGTCCTAAAGCCGAGGAAGATACACTGGCAGCGGGATAA
CACGGTTTCAGGGGACCCTCAACGTTTCACATCTCCAAGTCCAGTGGCCATTAGGACACT
CTCAGTATTAGTCTGCACTAAGGTCCGGCTCTGCCACATACTGCTTGTGTGACCTCAATG
ACTGACTTTACCTCTACTGACCTCAGTTTCCTAATCTGTAAAATGGGTCGAATCAATCTC
ATGGATTTCTTGGGCTGATAATTAACACAGAGAAAGTGCTCAGTATATGTTAGAAATGAC
CACCGGTTTGAAGCTATGCTACACCCCCACCCACCCCCCGCCCACACACTACCTTCTCTG
AAGTCATCATTACTCAATGGTGTCTAATGATCGCTGTCAGCCAGGTATCGGTTGTCACGT
GGCCCTTGTGGCCCATGCGTGCCACTTTGTAGATACAACGTGATCACAGTCTATGTGAAA
ATAAATCCCAAAGAACTCTTTCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATTCGGGCAGCTCCGCGCTATCATGGACCCTGAAGGCGGTGCAGGGGGCCCGGCGGG
CAGCCAACTTCGCCCTGAAGGTGGAGGTGGAGTGCAGCAGCCTGCAGGAGGCTCTGGAGG
CGGCCGAGGCAGGAGCTGACCTTGTCTTGCTGGACAACTTCAGGCCTGAGGAGCTGCACC
CCACGGCCGCGGCGCTGAAGGCTCAGTTCCCGACCGTGGGCGTGGAGGCCAGCGGGGGCG
TCACCCTGGACAACCTCCCTCAGTTCTGTGGGCCCCACATCGATGTCATCTCTCTGGGGA
TGCTAACCCAGGCAGCCCCAGCCCTGGATTTCTCCCTCAAGCTGTTTGCCGAAGGGACCA
CTCCAGTGCCCTACGCGCGCAAGTCCTAAAGCCGAGGAAGATACACTGGCAGCGGGATAA
CACGGTTTCAGGGGACCCTCAACGTTTCACATCTCCAAGTCCAGTGGCCATTAGGACACT
CTCAGTATTAGTCTGCACTAAGGTCCGGCTCTGCCACATACTGCTTGTGTGACCTCAATG
ACTGACTTTACCTCTACTGACCTCAGTTTCCTAATCTGTAAAATGGGTCGAATCAATCTC
ATGGATTTCTTGGGCTGATAATTAACACAGAGAAAGTGCTCAGTATATGTTAGAAATGAC
CACCGGTTTGAAGCTATGCTACACCCCCACCCACCCCCCGCCCACACACTACCTTCTCTG
AAGTCATCATTACTCAATGGTGTCTAATGATCGCTGTCAGCCAGGTATCGGTTGTCACGT
GGCCCTTGTGGCCCATGCGTGCCACTTTGTAGATACAACGTGATCACAGTCTATGTGAAA
ATAAATCCCAAAGAACTCTTTCAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|55643709|ref|XP_523333.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55643709|ref|XP_523333.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               169-864, gnl|bosTau2|chr25 (24483806-24484479)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               169-864, gnl|bosTau2|chr25 (24483806-24484479)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cli (0.611247)
               

               
               ece (0.229305)
               

               
               eye (0.170503)
               

               
               ute (0.132784)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.611247)
               

               
               ece (0.229305)
               

               
               eye (0.170503)
               

               
               ute (0.132784)