Ss1.1-Mixc-0027m24.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGCCACCATGAGGGCCGCTCTGAAGCTGTCCCAGGCCCCCGTCATCTTCAGCCACTCCT CGGCCTACAGTCTGTGCCCGCACCGGCGCAACGTGCCGGATGACGTGCTCCAGCTGGTGA AGGAGACGGGCAGCCTCGTGATGGTCAATTTCTACAACGACTACGTTTCCTGCTCGGCCA AGGCCAACTTGTCCCAAGTGGCAGATCACCTGGACCACATCAAGAAGGTGGCGGGAGCTG CGGCCGTGGGCTTCGGTGGGGACTACGATGGTGTGTCCAGGGTCCCCTCAGGCCTGGAGG ACGTGTCCAAGTACCCAGACCTGGTGGCCGAGCTGCTCAGGAGGCAGTGGACGGAGGCCG AGGTCAGGGGCGCCCTGGCCGACAACCTGCTGAGGGTCTTCGAGGCAGTGGAGCAGGCCA GCAATCACGCTCAGGTTCCAGGGGAGGAGCCCATCCCGCTGGGCCAGCTGGAGGCTTCCT GCCGGACGAACTACGGCTACTCAGCCGCCCCCAGCCTCCACCTCCCGCCGGGCTCGCTGC TGGCCTCCCTCGTGCCCCTGCTCCTCCTCAGTCTTCCGTGACTCCCCCGGGGACCAGCTG ACACGCACTGTGCAGGCGTAGACTGGTCTGCCCTGAGCAGGGCCCCGGCTCCGGGAGGCG CCCTGGGACCCTCAATAAAGGTACCGACACTTCGAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGCCACCATGAGGGCCGCTCTGAAGCTGTCCCAGGCCCCCGTCATCTTCAGCCACTCCT CGGCCTACAGTCTGTGCCCGCACCGGCGCAACGTGCCGGATGACGTGCTCCAGCTGGTGA AGGAGACGGGCAGCCTCGTGATGGTCAATTTCTACAACGACTACGTTTCCTGCTCGGCCA AGGCCAACTTGTCCCAAGTGGCAGATCACCTGGACCACATCAAGAAGGTGGCGGGAGCTG CGGCCGTGGGCTTCGGTGGGGACTACGATGGTGTGTCCAGGGTCCCCTCAGGCCTGGAGG ACGTGTCCAAGTACCCAGACCTGGTGGCCGAGCTGCTCAGGAGGCAGTGGACGGAGGCCG AGGTCAGGGGCGCCCTGGCCGACAACCTGCTGAGGGTCTTCGAGGCAGTGGAGCAGGCCA GCAATCACGCTCAGGTTCCAGGGGAGGAGCCCATCCCGCTGGGCCAGCTGGAGGCTTCCT GCCGGACGAACTACGGCTACTCAGCCGCCCCCAGCCTCCACCTCCCGCCGGGCTCGCTGC TGGCCTCCCTCGTGCCCCTGCTCCTCCTCAGTCTTCCGTGACTCCCCCGGGGACCAGCTG ACACGCACTGTGCAGGCGTAGACTGGTCTGCCCTGAGCAGGGCCCCGGCTCCGGGAGGCG CCCTGGGACCCTCAATAAAGGTACCGACACTTCGAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-119, gnl|bosTau2|chr18 (15431403-15431521) | |
| 1-119, gnl|canFam2|chr5 (66908533-66908332) | |
| 1-119, gnl|danRer3|chr7 (45966782-45966981) | |
| 1-119, gnl|dasNov1|scaffold_72749 (3049-2855) | |
| 1-119, gnl|echTel1|scaffold_315981 (5955-6149) | |
| 1-119, gnl|fr1|chrUn (95255777-95255587) | |
| 1-119, gnl|galGal2|chr11 (18765066-18764865) | |
| 1-119, gnl|hg17|chr16 (88231099-88231298) | |
| 1-119, gnl|Hg17|chr16 (88231171-88231289) | |
| 1-119, gnl|loxAfr1|scaffold_6601 (37326-37132) | |
| 1-119, gnl|mm7|chr8 (121840992-121841196) | |
| 1-119, gnl|Mm7|chr8 (121841069-121841187) | |
| 1-119, gnl|monDom2|scaffold_23 (6234090-6233896) | |
| 1-119, gnl|oryCun1|scaffold_95800 (10861-11061) | |
| 1-119, gnl|panTro1|chr18 (83250720-83250919) | |
| 1-119, gnl|rheMac2|chr20 (87764379-87764578) | |
| 1-119, gnl|rn3|chr19 (53522069-53522273) | |
| 1-119, gnl|tetNig1|chrUn_random (119876738-119876932) | |
| 1-119, gnl|xenTro1|scaffold_13 (2863961-2864145) | |
| 414-582, gnl|bosTau2|chr18 (15432178-15432349) | |
| 414-582, gnl|Hg17|chr16 (88231958-88232132) | |
| 414-582, gnl|Mm7|chr8 (121841959-121842130) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-119, gnl|bosTau2|chr18 (15431403-15431521) | |
| 1-119, gnl|canFam2|chr5 (66908533-66908332) | |
| 1-119, gnl|danRer3|chr7 (45966782-45966981) | |
| 1-119, gnl|dasNov1|scaffold_72749 (3049-2855) | |
| 1-119, gnl|echTel1|scaffold_315981 (5955-6149) | |
| 1-119, gnl|fr1|chrUn (95255777-95255587) | |
| 1-119, gnl|galGal2|chr11 (18765066-18764865) | |
| 1-119, gnl|hg17|chr16 (88231099-88231298) | |
| 1-119, gnl|Hg17|chr16 (88231171-88231289) | |
| 1-119, gnl|loxAfr1|scaffold_6601 (37326-37132) | |
| 1-119, gnl|mm7|chr8 (121840992-121841196) | |
| 1-119, gnl|Mm7|chr8 (121841069-121841187) | |
| 1-119, gnl|monDom2|scaffold_23 (6234090-6233896) | |
| 1-119, gnl|oryCun1|scaffold_95800 (10861-11061) | |
| 1-119, gnl|panTro1|chr18 (83250720-83250919) | |
| 1-119, gnl|rheMac2|chr20 (87764379-87764578) | |
| 1-119, gnl|rn3|chr19 (53522069-53522273) | |
| 1-119, gnl|tetNig1|chrUn_random (119876738-119876932) | |
| 1-119, gnl|xenTro1|scaffold_13 (2863961-2864145) | |
| 414-582, gnl|bosTau2|chr18 (15432178-15432349) | |
| 414-582, gnl|Hg17|chr16 (88231958-88232132) | |
| 414-582, gnl|Mm7|chr8 (121841959-121842130) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ill (0.877963) | |
| jej (0.197844) | |
| cki (0.165235) | |
| nco (0.161734) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.877963) | |
| jej (0.197844) | |
| cki (0.165235) | |
| nco (0.161734) |