Non-Coding RNA Search

Ss1.1-Mixc-0027p01.5

Sequence:


               
               GTTTTATATATGCAGGAAAGGAAGCAGTTGTACTAGAAATCAATCTTTATTTTTTACCCC
ACTACTAGGTAAGGGACCTGGAAACCAAGAAGTGACTGCTCATCCAATCCATAAAGCTAT
GTTAACAGATTGGAGGTAGTAGCATTTTCATTACCAGTGACTAAATTCCCTGATCATGCA
AGAGTACTTGCTGTTCCCGAAAATCTTGTACTTAGGTTCAAACTGAAGTTGGGGGAGGTG
ATGTACATTTGAGAAGCTGTATATCTGTTTAGAAGTAGGTGTGATACAAATAAAAGTTCT
AGTCACTTTTTAGAAGCCTCACACTATTTGAGTCATTGCTGGTTGTGAATTTTTGGCATG
TCTCTGGGTCTTATGTTGCGTAACCCAACCCCACAGGACCTTAAGGCTGTCAGGGATAGC
TCTTATTTGGGATTCAAAGTAATTACTGAAGCAGCATTCTCTTCTAGTGAGAAAATGAAT
TTGATTCAGAAGCCCCTAAAGACAAAGATACTAAACAAAATGTGTAAGCAGATGTTGTTA
ATTAACTGTCATCTTCTCTTACAGCTGTTTGCAGACAAAGTTCCAAAGACAGCAGAAAAC
TTCCGTGCTCTGAGCACTGGGGAGAAAGGATTTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTATATATGCAGGAAAGGAAGCAGTTGTACTAGAAATCAATCTTTATTTTTTACCCC
ACTACTAGGTAAGGGACCTGGAAACCAAGAAGTGACTGCTCATCCAATCCATAAAGCTAT
GTTAACAGATTGGAGGTAGTAGCATTTTCATTACCAGTGACTAAATTCCCTGATCATGCA
AGAGTACTTGCTGTTCCCGAAAATCTTGTACTTAGGTTCAAACTGAAGTTGGGGGAGGTG
ATGTACATTTGAGAAGCTGTATATCTGTTTAGAAGTAGGTGTGATACAAATAAAAGTTCT
AGTCACTTTTTAGAAGCCTCACACTATTTGAGTCATTGCTGGTTGTGAATTTTTGGCATG
TCTCTGGGTCTTATGTTGCGTAACCCAACCCCACAGGACCTTAAGGCTGTCAGGGATAGC
TCTTATTTGGGATTCAAAGTAATTACTGAAGCAGCATTCTCTTCTAGTGAGAAAATGAAT
TTGATTCAGAAGCCCCTAAAGACAAAGATACTAAACAAAATGTGTAAGCAGATGTTGTTA
ATTAACTGTCATCTTCTCTTACAGCTGTTTGCAGACAAAGTTCCAAAGACAGCAGAAAAC
TTCCGTGCTCTGAGCACTGGGGAGAAAGGATTTGGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-595, gnl|bosTau2|chr4 (43078508-43079125)
               

               
               2-595, gnl|Hg17|chr7 (44611517-44612116)
               

               
               2-595, gnl|Mm7|chr11 (6369627-6370134)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-595, gnl|bosTau2|chr4 (43078508-43079125)
               

               
               2-595, gnl|Hg17|chr7 (44611517-44612116)
               

               
               2-595, gnl|Mm7|chr11 (6369627-6370134)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               nje (0.16592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               nje (0.16592)

	2-595, gnl\|bosTau2\|chr4 (43078508-43079125)
	2-595, gnl\|Hg17\|chr7 (44611517-44612116)
	2-595, gnl\|Mm7\|chr11 (6369627-6370134)