Non-Coding RNA Search

Ss1.1-Mixc-0028d15.3

Sequence:


               
               GCGTTGCCTCCCGCAGCCATGACTCTCCAGGTTTTAATCTCGGGAGCGTCCAAAATATCG
TAACCGCATCACGATGCGGGAGACGGTCTGTGCTCAGTGCTGCGCCCTAGGTGGTGGGCA
AGGCAGTGTGTCTGATTTCCTTCCTCTGAAAGTGCAAGATGGTGTGTTGTTCAGTCTCAG
AGGGGACCTCTCACTTGAAACCCTAGCACTCTCGGATGACCCCGCAGGAGCTTAGGGGAG
GACCCCGTGGCTGTGATTCTGTGATTCGCACAAAGATCCTGGGCCACACTGCTATAACTT
AAAATGGGGATGGGTAAATAACTTTTCAGGTAATTGTAAATTGATTTTTCTAGAGTACGG
GTATCTTCACTCATTTCTGGAACTGACGCTAAAATCTCAAAACACAGTTGTAATGCATTT
TGTTAAAAGAAATACAAACTATGGGGCAGTTTTAGAAAATGACATGAAATGGTAGGGTGG
GAGTTCCCGCTGTAGCACAGTGTGTTAAGAATCCGACTGCAACTGACTGGAGTCCTACAG
AGGCATGGGTTCCATCCTGGGCCAGTCGTTCAGCCACAGTGGATTAAAGCTGCAGTTTTG
ATTTAGTCCCTAGCTTGGGAATTTGCATATGTTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGTTGCCTCCCGCAGCCATGACTCTCCAGGTTTTAATCTCGGGAGCGTCCAAAATATCG
TAACCGCATCACGATGCGGGAGACGGTCTGTGCTCAGTGCTGCGCCCTAGGTGGTGGGCA
AGGCAGTGTGTCTGATTTCCTTCCTCTGAAAGTGCAAGATGGTGTGTTGTTCAGTCTCAG
AGGGGACCTCTCACTTGAAACCCTAGCACTCTCGGATGACCCCGCAGGAGCTTAGGGGAG
GACCCCGTGGCTGTGATTCTGTGATTCGCACAAAGATCCTGGGCCACACTGCTATAACTT
AAAATGGGGATGGGTAAATAACTTTTCAGGTAATTGTAAATTGATTTTTCTAGAGTACGG
GTATCTTCACTCATTTCTGGAACTGACGCTAAAATCTCAAAACACAGTTGTAATGCATTT
TGTTAAAAGAAATACAAACTATGGGGCAGTTTTAGAAAATGACATGAAATGGTAGGGTGG
GAGTTCCCGCTGTAGCACAGTGTGTTAAGAATCCGACTGCAACTGACTGGAGTCCTACAG
AGGCATGGGTTCCATCCTGGGCCAGTCGTTCAGCCACAGTGGATTAAAGCTGCAGTTTTG
ATTTAGTCCCTAGCTTGGGAATTTGCATATGTTGTG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               182-478, gnl|bosTau2|chr10 (42842042-42842330)
               

               
               182-478, gnl|Hg17|chr15 (46410478-46410227)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               182-478, gnl|bosTau2|chr10 (42842042-42842330)
               

               
               182-478, gnl|Hg17|chr15 (46410478-46410227)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cje (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)

	182-478, gnl\|bosTau2\|chr10 (42842042-42842330)
	182-478, gnl\|Hg17\|chr15 (46410478-46410227)