Non-Coding RNA Search

Ss1.1-Mixc-0028i17.5

Sequence:


               
               GGGAGCCAGAGGGGAGCGCAGCGAGTCCTGGCCTNGGGTCCTGCAGTCCACGGGGCTGGA
TGGCATGCTGGACCCAAGCTCAGCGCAGTGTCCGGGCCCAATAACGGCTTTTCCAAGGGA
GCAGCTTTCTGTCCTGGCCACACTGAGGTGCATAGCGTAATGTCCATGTTGTTCTACACT
CTGATCACAGCTCTTCTGATCGGCGTACAGGCAGAACCGCACACCGAGAGCAATGTCCCA
GCAGGACACGCCATCCCCCAAGCCCACCGGACTAAACTTCAGCATTCCCTTGACACAGCC
CTCCGCAGAGCCCACAGTGCCCCGGCTGGGGCGATAGCCGCCAGGGTGGCAGGGCAGACC
CGCAACATCACTGTGGACCCCAAACTTTTTAAAAAGCGGCGACTGCGTTCACCCCGAGTG
CTGTTTAGCACCCAGCCCCCGTCTGTGGCCGCAGACACTCAGGATCCGGACTTGGAGGCC
AGCGGCGCCGCCTCCTTCAACAGGACTCACAGGAGCAAGCGGTCGTCATCCCACCCCGTT
TTCCACCGGGGGGAGTTCTCGGTGTGCGACAGCGTCAGCGTGTGGGTGGGGGACAAGACC
ACTGCCACGGACATCAAGGGCAAGGAGGTGATGGTGTTGGGAGAGGTGAATATCAACAAC
AGCGTGTTTAAACAGTACTTTTTTGAGACCAAGTGCCGGGACCCCAATCCCGTGGACAGC
GGGTGCCGGGGCATCGACTCAAAGCACTGGAACTCGTATTGTACCACAACCCACACCTTT
GTCAAGGCGCTGACCATGGACGGCAAGCAGGCTGCCTGGCGGTTTATCCGAATCGACACG
GCCTGCGTGTGCGTGCTCAGCAGGAAGGCGGGGAGAAGAGCCTGACCTGCAAGCCAGCCC
CCACCTCCCCCAGCTCCCCACCCACACTCTCCTGCGCCCCTCCCTACCTCAGCCTGTAAA
TTATTTTAAATTATAAGGACTGCATGGTAATTTATAGTTTATACAGTTTTAAAAATCATT
ATTTATTAAATTTTTGGAAGCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGCCAGAGGGGAGCGCAGCGAGTCCTGGCCTNGGGTCCTGCAGTCCACGGGGCTGGA
TGGCATGCTGGACCCAAGCTCAGCGCAGTGTCCGGGCCCAATAACGGCTTTTCCAAGGGA
GCAGCTTTCTGTCCTGGCCACACTGAGGTGCATAGCGTAATGTCCATGTTGTTCTACACT
CTGATCACAGCTCTTCTGATCGGCGTACAGGCAGAACCGCACACCGAGAGCAATGTCCCA
GCAGGACACGCCATCCCCCAAGCCCACCGGACTAAACTTCAGCATTCCCTTGACACAGCC
CTCCGCAGAGCCCACAGTGCCCCGGCTGGGGCGATAGCCGCCAGGGTGGCAGGGCAGACC
CGCAACATCACTGTGGACCCCAAACTTTTTAAAAAGCGGCGACTGCGTTCACCCCGAGTG
CTGTTTAGCACCCAGCCCCCGTCTGTGGCCGCAGACACTCAGGATCCGGACTTGGAGGCC
AGCGGCGCCGCCTCCTTCAACAGGACTCACAGGAGCAAGCGGTCGTCATCCCACCCCGTT
TTCCACCGGGGGGAGTTCTCGGTGTGCGACAGCGTCAGCGTGTGGGTGGGGGACAAGACC
ACTGCCACGGACATCAAGGGCAAGGAGGTGATGGTGTTGGGAGAGGTGAATATCAACAAC
AGCGTGTTTAAACAGTACTTTTTTGAGACCAAGTGCCGGGACCCCAATCCCGTGGACAGC
GGGTGCCGGGGCATCGACTCAAAGCACTGGAACTCGTATTGTACCACAACCCACACCTTT
GTCAAGGCGCTGACCATGGACGGCAAGCAGGCTGCCTGGCGGTTTATCCGAATCGACACG
GCCTGCGTGTGCGTGCTCAGCAGGAAGGCGGGGAGAAGAGCCTGACCTGCAAGCCAGCCC
CCACCTCCCCCAGCTCCCCACCCACACTCTCCTGCGCCCCTCCCTACCTCAGCCTGTAAA
TTATTTTAAATTATAAGGACTGCATGGTAATTTATAGTTTATACAGTTTTAAAAATCATT
ATTTATTAAATTTTTGGAAGCAGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               NGF_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               NGF_PIG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               146-1043, gnl|bosTau2|chr3 (22447902-22448798)
               

               
               146-1043, gnl|Hg17|chr1 (115541472-115540579)
               

               
               146-1043, gnl|Mm7|chr3 (102314001-102314893)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               146-1043, gnl|bosTau2|chr3 (22447902-22448798)
               

               
               146-1043, gnl|Hg17|chr1 (115541472-115540579)
               

               
               146-1043, gnl|Mm7|chr3 (102314001-102314893)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	146-1043, gnl\|bosTau2\|chr3 (22447902-22448798)
	146-1043, gnl\|Hg17\|chr1 (115541472-115540579)
	146-1043, gnl\|Mm7\|chr3 (102314001-102314893)