Non-Coding RNA Search

Ss1.1-Mixc-0029,m08.3

Sequence:


               
               CTAGCCTGCCTGTGGATATTGGCCAATCAAACCTCATCTTTGCTCGTTCTAAGCCCACCT
GAGCAGTAGTTGTCTCTTGACATAATCAGAGTCACGATTTCCATGTTTCCGTCCGTGGTG
CCGTCTTCCATGTCTGCCACATCACGTCATCCCCTCTAGCAGATGTGTCAGGTAGAATTC
TCCTACTCAGAATAGAAACTTTGTGAGTTATCTTTCCTACATCTAGATTTTAAAAAATTA
ATGTAGATGTTGGCTAGTTTGGCTAATGTTACAAGAGTGGGAAGTTCTTTGCCTCTGATC
AGCAGGGTTCCTGCCTCTGAGGTGCTATTGCCTAGAGGGATCAATCCTGTCGAAAGACTG
GTGAGTTGGTAGCTGTAGAGAATATACACATAGCCGGCTATGTCTCCCAGGCTGTCAGTC
ATGATCATGAGCATCATTCCAGAATGTCTGGCTTCCAGCACCAACTCCATTCTGAAGAAC
ATTTTAACATCTATTAATACTTTGGTAATAATCTTTTATATGCAGGATTTTTGTAGCATG
ACTTTATGACTAAACTTATTGTGTTAACTTATTTAGAAATGTTGAGTTTCTGAGTGTTAT
TTTGTCAGATTTGTTTTAAAATAGTAATAAACTGTGTTATTTTATAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGCCTGCCTGTGGATATTGGCCAATCAAACCTCATCTTTGCTCGTTCTAAGCCCACCT
GAGCAGTAGTTGTCTCTTGACATAATCAGAGTCACGATTTCCATGTTTCCGTCCGTGGTG
CCGTCTTCCATGTCTGCCACATCACGTCATCCCCTCTAGCAGATGTGTCAGGTAGAATTC
TCCTACTCAGAATAGAAACTTTGTGAGTTATCTTTCCTACATCTAGATTTTAAAAAATTA
ATGTAGATGTTGGCTAGTTTGGCTAATGTTACAAGAGTGGGAAGTTCTTTGCCTCTGATC
AGCAGGGTTCCTGCCTCTGAGGTGCTATTGCCTAGAGGGATCAATCCTGTCGAAAGACTG
GTGAGTTGGTAGCTGTAGAGAATATACACATAGCCGGCTATGTCTCCCAGGCTGTCAGTC
ATGATCATGAGCATCATTCCAGAATGTCTGGCTTCCAGCACCAACTCCATTCTGAAGAAC
ATTTTAACATCTATTAATACTTTGGTAATAATCTTTTATATGCAGGATTTTTGTAGCATG
ACTTTATGACTAAACTTATTGTGTTAACTTATTTAGAAATGTTGAGTTTCTGAGTGTTAT
TTTGTCAGATTTGTTTTAAAATAGTAATAAACTGTGTTATTTTATAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-651, gnl|bosTau2|chr10 (60274516-60275168)
               

               
               3-651, gnl|Hg17|chr14 (73237772-73238406)
               

               
               3-651, gnl|Mm7|chr12 (82138746-82139450)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-651, gnl|bosTau2|chr10 (60274516-60275168)
               

               
               3-651, gnl|Hg17|chr14 (73237772-73238406)
               

               
               3-651, gnl|Mm7|chr12 (82138746-82139450)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cte (0.29274)
               

               
               cbe (0.239234)
               

               
               ste (0.135208)
               

               
               ute (0.132784)
               

               
               ova (0.129132)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               cbe (0.239234)
               

               
               ste (0.135208)
               

               
               ute (0.132784)
               

               
               ova (0.129132)

	3-651, gnl\|bosTau2\|chr10 (60274516-60275168)
	3-651, gnl\|Hg17\|chr14 (73237772-73238406)
	3-651, gnl\|Mm7\|chr12 (82138746-82139450)

	cte (0.29274)
	cbe (0.239234)
	ste (0.135208)
	ute (0.132784)
	ova (0.129132)