Ss1.1-Mixc-0029d09.5
|
GAACCAAGCTGACTGGAGGACATGGCCACTTCTCGCTTACCCCCAGCGACGCTAACGCTA
AAACAGTTCATGAGAAGGCAGCAAGTTCTCCTCCTCTACAGAAGGATTTTGCAAGCAATT
CGGCAAGTTCCAAATGATTCTGATCGCAGATACCTGAAGGACTGGGCAAGGGAAGAATTC
AAAAGAAACAAAAATGCCACCGAAGAGGATACAATCCGGATGATGATTACTCAAGGCAAT
ATGCAGCTCAAGGAGTTAGAAAAAACACTTGCCTTAGCCAGATCTTAACTACAACATTAT
TCTGAAAGATTTTGAAAGTTTCCATGTATTTAGTTGAGCTGAAGTTCAACAATGGGCAGC
CCCAAACCAAGTGAAACTGTATGTAAAGCCTCTTGGCAGGATCTCAGAACATGGAGAATG
GCAGTTCACAGAGAGAGTCAAGAAAAGTACGTCAGAGCAATTGCCTCAGCACTGGAAAAC
TTACCTGTGTTTTGACAATGTTTTTGGATGGGTCAGCAGTTTTTGTAAGAAGCAAAAATC
AGTCTGATAGATGGTCAGCACATAAAAAGATGTTCAGCAGCATTAATCATCAGGGAAATG
CAAATAAAAACCACCCAGAGATACTATTCACATCCACTAGAATGGCAGTAATTAAAAAGG
GAGAAAATTGGAAATGTTGGTGAAGAACCTGGAACCCTTTTACATTGCTGGTGGGACGAT
GAAATTGTGCAGCCTCTTTGGAAAACAGACTGAGTTGCCCAAAAGAGTAAATAGCATTAT
TCATGACAGCCAAAAAGTAGACAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAACCAAGCTGACTGGAGGACATGGCCACTTCTCGCTTACCCCCAGCGACGCTAACGCTA
AAACAGTTCATGAGAAGGCAGCAAGTTCTCCTCCTCTACAGAAGGATTTTGCAAGCAATT
CGGCAAGTTCCAAATGATTCTGATCGCAGATACCTGAAGGACTGGGCAAGGGAAGAATTC
AAAAGAAACAAAAATGCCACCGAAGAGGATACAATCCGGATGATGATTACTCAAGGCAAT
ATGCAGCTCAAGGAGTTAGAAAAAACACTTGCCTTAGCCAGATCTTAACTACAACATTAT
TCTGAAAGATTTTGAAAGTTTCCATGTATTTAGTTGAGCTGAAGTTCAACAATGGGCAGC
CCCAAACCAAGTGAAACTGTATGTAAAGCCTCTTGGCAGGATCTCAGAACATGGAGAATG
GCAGTTCACAGAGAGAGTCAAGAAAAGTACGTCAGAGCAATTGCCTCAGCACTGGAAAAC
TTACCTGTGTTTTGACAATGTTTTTGGATGGGTCAGCAGTTTTTGTAAGAAGCAAAAATC
AGTCTGATAGATGGTCAGCACATAAAAAGATGTTCAGCAGCATTAATCATCAGGGAAATG
CAAATAAAAACCACCCAGAGATACTATTCACATCCACTAGAATGGCAGTAATTAAAAAGG
GAGAAAATTGGAAATGTTGGTGAAGAACCTGGAACCCTTTTACATTGCTGGTGGGACGAT
GAAATTGTGCAGCCTCTTTGGAAAACAGACTGAGTTGCCCAAAAGAGTAAATAGCATTAT
TCATGACAGCCAAAAAGTAGACAG
|
|
gi|55725909|emb|CAH89734.1| |
Protein identifier
|
gi|55725909|emb|CAH89734.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
206-803, gnl|bosTau2|chr9 (33372906-33373524) |
|
206-803, gnl|Hg17|chr6 (90403795-90402949) |
| |
|
517-796, gnl|bosTau2|chr18 (41156816-41157100) |
| |
|
535-792, gnl|bosTau2|chr16 (29323148-29322891) |
| |
|
536-786, gnl|bosTau2|chr10 (39970847-39970584) |
| |
|
547-771, gnl|bosTau2|chr10 (57023476-57023711) |
|
547-771, gnl|hg17|chr14 (74982418-74982733) |
|
547-771, gnl|Hg17|chr14 (74982486-74982719) |
|
547-771, gnl|mm7|chr12 (83618575-83618827) |
|
547-771, gnl|panTro1|chr15 (75016396-75016710) |
|
547-771, gnl|rheMac2|chr7 (138562751-138563061) |
|
547-771, gnl|rn3|chr6 (109721693-109721922) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
206-803, gnl|bosTau2|chr9 (33372906-33373524) |
|
206-803, gnl|Hg17|chr6 (90403795-90402949) |
| |
|
517-796, gnl|bosTau2|chr18 (41156816-41157100) |
| |
|
535-792, gnl|bosTau2|chr16 (29323148-29322891) |
| |
|
536-786, gnl|bosTau2|chr10 (39970847-39970584) |
| |
|
547-771, gnl|bosTau2|chr10 (57023476-57023711) |
|
547-771, gnl|hg17|chr14 (74982418-74982733) |
|
547-771, gnl|Hg17|chr14 (74982486-74982719) |
|
547-771, gnl|mm7|chr12 (83618575-83618827) |
|
547-771, gnl|panTro1|chr15 (75016396-75016710) |
|
547-771, gnl|rheMac2|chr7 (138562751-138563061) |
|
547-771, gnl|rn3|chr6 (109721693-109721922) |
|
tbr (0.308356) |
|
ova (0.258264) |
|
bla (0.248694) |
|
tra (0.246184) |
|
tes (0.207814) |
|
hea (0.204499) |
|
fhi (0.169578) |
|
fco (0.157208) |
|
lun (0.150489) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
liv (0.146284) |
|
spl (0.143184) |
|
lyg (0.133103) |
|
pgl (0.118483) |
|
jej (0.0989218) |
|
tbr (0.308356) |
|
ova (0.258264) |
|
bla (0.248694) |
|
tra (0.246184) |
|
tes (0.207814) |
|
hea (0.204499) |
|
fhi (0.169578) |
|
fco (0.157208) |
|
lun (0.150489) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
liv (0.146284) |
|
spl (0.143184) |
|
lyg (0.133103) |
|
pgl (0.118483) |
|
jej (0.0989218) |
