Non-Coding RNA Search

Ss1.1-Mixc-0029i20.5

Sequence:


               
               GATAAATAGCCTCATATAAAAACAGCAAATTCACATCCAGCAAACTCAACAAAACCTTTG
TCCTCTTTGAGTTTTGGTCTTGAGCAAAAAGTCCGGGGATATCGATCAAGGAATTCAAGG
GCATCAGGAATGTTATATACTATTGGAGGAAATGACATTTAAAATTTCAAAATCCCATTT
CACTTAAAGTACAAAATCTAATCTGGTGTGTTTAAATTTTATTTAGTCATTTTTATTCAT
GATAGTTGATAAATGTATTATAATTGATAATTGTTGGTAAGTATAGTACAAAGTATACTT
CTATCTTAAAAATCTTTCTGCACAACAGTATAGTTACGGCAAAGCTACGTTGAATGAGTT
TAGGAACATCAAATATACAATAGTGCCCTATTTTCAATTGTGAAAATGAAGTGGCTGATG
CAGAAGAGACCTCTATTTTAATCTTTTGCAATTGGGTGTTGTCTTCTTTTCTCAAGACTA
AAGAACATGTATGTTTTGTTATTTCTCCTTGTTACATCCCTGAGAAGAGGCTCTACCAAA
AATCTTAGAGAACAGACACAGAAAGGTCGATATCACATGTTCCCCACTCGTAGGTCTAGA
CCCAGGATCATATTCTGTCACTGTTAAGGCTTTTTCCTTAGAAAGTGCAATATAGGAAAA
CACTTTGAGAATCTTTTTGAAGCCTGGTGTTCCCCATTATTATTAGAATCTATGGTATTG
CCATCCATAAGTATCTGTTAAGCTTGTGTTTAGTAAGAGACATAGTGTGATAACTTACTG
AGGACAATCATCCACATAATGTACCAGCTGACCCTGAGCGCTATGAAAATTCACTCAGTA
ACACTCTGTGTTGGTCATGAGAGAAAACATATATATTACTTTTGGGATAATTAATGCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAAATAGCCTCATATAAAAACAGCAAATTCACATCCAGCAAACTCAACAAAACCTTTG
TCCTCTTTGAGTTTTGGTCTTGAGCAAAAAGTCCGGGGATATCGATCAAGGAATTCAAGG
GCATCAGGAATGTTATATACTATTGGAGGAAATGACATTTAAAATTTCAAAATCCCATTT
CACTTAAAGTACAAAATCTAATCTGGTGTGTTTAAATTTTATTTAGTCATTTTTATTCAT
GATAGTTGATAAATGTATTATAATTGATAATTGTTGGTAAGTATAGTACAAAGTATACTT
CTATCTTAAAAATCTTTCTGCACAACAGTATAGTTACGGCAAAGCTACGTTGAATGAGTT
TAGGAACATCAAATATACAATAGTGCCCTATTTTCAATTGTGAAAATGAAGTGGCTGATG
CAGAAGAGACCTCTATTTTAATCTTTTGCAATTGGGTGTTGTCTTCTTTTCTCAAGACTA
AAGAACATGTATGTTTTGTTATTTCTCCTTGTTACATCCCTGAGAAGAGGCTCTACCAAA
AATCTTAGAGAACAGACACAGAAAGGTCGATATCACATGTTCCCCACTCGTAGGTCTAGA
CCCAGGATCATATTCTGTCACTGTTAAGGCTTTTTCCTTAGAAAGTGCAATATAGGAAAA
CACTTTGAGAATCTTTTTGAAGCCTGGTGTTCCCCATTATTATTAGAATCTATGGTATTG
CCATCCATAAGTATCTGTTAAGCTTGTGTTTAGTAAGAGACATAGTGTGATAACTTACTG
AGGACAATCATCCACATAATGTACCAGCTGACCCTGAGCGCTATGAAAATTCACTCAGTA
ACACTCTGTGTTGGTCATGAGAGAAAACATATATATTACTTTTGGGATAATTAATGCATA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               62-900, gnl|bosTau2|chr8 (29052170-29053011)
               

               
               62-900, gnl|Hg17|chr9 (37855330-37856177)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               62-900, gnl|bosTau2|chr8 (29052170-29053011)
               

               
               62-900, gnl|Hg17|chr9 (37855330-37856177)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               mas (0.210305)
               

               
               sag (0.182715)
               

               
               lin (0.145603)
               

               
               pty (0.142714)
               

               
               ret (0.128733)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               sag (0.182715)
               

               
               lin (0.145603)
               

               
               pty (0.142714)
               

               
               ret (0.128733)

	62-900, gnl\|bosTau2\|chr8 (29052170-29053011)
	62-900, gnl\|Hg17\|chr9 (37855330-37856177)

	mas (0.210305)
	sag (0.182715)
	lin (0.145603)
	pty (0.142714)
	ret (0.128733)