Ss1.1-Mixc-0029n02.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATCGCTGGATATTAAGCCGTTTCTTCCCTTTCCTCTTGACACTGCGGCCGCAGTCAACC TCTTCCCCAATTTTAACGCGATGGACCCAATTCAGAAAGCTGTAATAAATCATACTTTCG GGGTTCCTCTCCCTCATCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGAT TTAATTCCGATAGCCAGGCCGCGGCCCACTACAAAGGCACGAAACATGCCAAGAAGCTCA AAGCACTGGAAGCCATGAAAAATAAGCAGAAATCTGTCACTGCCAAGGACAGCGCAAAGA CTACCTTCACCTCCATCACTACCAATACCATCAATACCAGCTCTGACAAAACAGACACTA CCACAGGGACACCAGCAATATCGACTACGACAACTGTGGAAATTCGCAAAAGCAGTGTTA TGACAACTGAGATCACCTCTAAAGTGGAGAAAAGCCCCACGACAGCCACTGGCAATAGCT CATGTCCTTCCACGGAGACTGAGGAAGAAAAGGCAAAACGGCTTCTTTACTGTTCGCTAT GCAAGGTTGCTGTCAACTCCGCCTCACAGCTGGAGGCTCACAACAGTGGTACTAAGCACA AAACCATGCTAGAAGCCCGGAATGGAAGTGGAACTATCAAAGCCTTCCCCAGGGCAGGTG TGAAAGGCAAAGGACCAGTCAATAAGGGGAATACAGGCCTGCAAAACAAAACGTTTCACT GTGAAATCTGTGATGTGCACGTCAACTCGGAAACACAACTTAAACAGCACATTAGCAGTA GAAGGCACAAAGACAGAGCTGCTGGGAAGCCCCCCAAACCTAAATACAGTCCTTACAACA AACTGCAGAAGGCAGCACATCCGCTTGGGGTAAAATTGGTATTTTCAAAAGAACCTTCCA AGCCACTGGCTCCACGAATTCTACCCAACCCACTGGCAGCTGCAGCGGCTGCTGCGGCCG TGGCTGTGAATTCCCCCTTCAGTCTCAGAACGGCTCCAGCAGCAACGCTGTTCCAGGCTT CTGCACTCCCTCCAGCCCTCCTGCGGCCAGCTCCTGGACCCATTCGGACCGCCCACACTC CTGTGCTGTTTGCTCCTTACTGAATTCCAAATGGGAGTACTTGTACTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATCGCTGGATATTAAGCCGTTTCTTCCCTTTCCTCTTGACACTGCGGCCGCAGTCAACC TCTTCCCCAATTTTAACGCGATGGACCCAATTCAGAAAGCTGTAATAAATCATACTTTCG GGGTTCCTCTCCCTCATCGAAGAAAGCAAATCATATCATGCAACATTTGCCAGTTGAGAT TTAATTCCGATAGCCAGGCCGCGGCCCACTACAAAGGCACGAAACATGCCAAGAAGCTCA AAGCACTGGAAGCCATGAAAAATAAGCAGAAATCTGTCACTGCCAAGGACAGCGCAAAGA CTACCTTCACCTCCATCACTACCAATACCATCAATACCAGCTCTGACAAAACAGACACTA CCACAGGGACACCAGCAATATCGACTACGACAACTGTGGAAATTCGCAAAAGCAGTGTTA TGACAACTGAGATCACCTCTAAAGTGGAGAAAAGCCCCACGACAGCCACTGGCAATAGCT CATGTCCTTCCACGGAGACTGAGGAAGAAAAGGCAAAACGGCTTCTTTACTGTTCGCTAT GCAAGGTTGCTGTCAACTCCGCCTCACAGCTGGAGGCTCACAACAGTGGTACTAAGCACA AAACCATGCTAGAAGCCCGGAATGGAAGTGGAACTATCAAAGCCTTCCCCAGGGCAGGTG TGAAAGGCAAAGGACCAGTCAATAAGGGGAATACAGGCCTGCAAAACAAAACGTTTCACT GTGAAATCTGTGATGTGCACGTCAACTCGGAAACACAACTTAAACAGCACATTAGCAGTA GAAGGCACAAAGACAGAGCTGCTGGGAAGCCCCCCAAACCTAAATACAGTCCTTACAACA AACTGCAGAAGGCAGCACATCCGCTTGGGGTAAAATTGGTATTTTCAAAAGAACCTTCCA AGCCACTGGCTCCACGAATTCTACCCAACCCACTGGCAGCTGCAGCGGCTGCTGCGGCCG TGGCTGTGAATTCCCCCTTCAGTCTCAGAACGGCTCCAGCAGCAACGCTGTTCCAGGCTT CTGCACTCCCTCCAGCCCTCCTGCGGCCAGCTCCTGGACCCATTCGGACCGCCCACACTC CTGTGCTGTTTGCTCCTTACTGAATTCCAAATGGGAGTACTTGTACTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 80-191, gnl|bosTau2|chr27 (29269493-29269604) | |
| 80-191, gnl|canFam2|chr23 (24997980-24997839) | |
| 80-191, gnl|danRer3|chr3 (5842298-5842168) | |
| 80-191, gnl|dasNov1|scaffold_41378 (7121-6985) | |
| 80-191, gnl|echTel1|scaffold_309395 (39065-39219) | |
| 80-191, gnl|fr1|chrUn (96703462-96703598) | |
| 80-191, gnl|galGal2|chr2 (35466228-35466362) | |
| 80-191, gnl|hg17|chr3 (21581066-21581209) | |
| 80-191, gnl|Hg17|chr3 (21581181-21581070) | |
| 80-191, gnl|loxAfr1|scaffold_13194 (23990-23849) | |
| 80-191, gnl|mm7|chr11 (31283214-31283350) | |
| 80-191, gnl|Mm7|chr11 (31283329-31283218) | |
| 80-191, gnl|monDom2|scaffold_7 (77377016-77377154) | |
| 80-191, gnl|oryCun1|scaffold_214704 (11150-11009) | |
| 80-191, gnl|rheMac2|chr2 (163809942-163810085) | |
| 80-191, gnl|rn3|chr15 (6687127-6687272) | |
| 80-191, gnl|tetNig1|chr3 (12772086-12771952) | |
| 80-191, gnl|xenTro1|scaffold_43 (813932-814067) | |
| 352-590, gnl|bosTau2|chr27 (29395157-29395392) | |
| 352-590, gnl|Hg17|chr3 (21453702-21453464) | |
| 760-871, gnl|bosTau2|chr27 (29411905-29412016) | |
| 760-871, gnl|Hg17|chr3 (21440568-21440457) | |
| 760-871, gnl|Mm7|chr2 (77257779-77257668) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 80-191, gnl|bosTau2|chr27 (29269493-29269604) | |
| 80-191, gnl|canFam2|chr23 (24997980-24997839) | |
| 80-191, gnl|danRer3|chr3 (5842298-5842168) | |
| 80-191, gnl|dasNov1|scaffold_41378 (7121-6985) | |
| 80-191, gnl|echTel1|scaffold_309395 (39065-39219) | |
| 80-191, gnl|fr1|chrUn (96703462-96703598) | |
| 80-191, gnl|galGal2|chr2 (35466228-35466362) | |
| 80-191, gnl|hg17|chr3 (21581066-21581209) | |
| 80-191, gnl|Hg17|chr3 (21581181-21581070) | |
| 80-191, gnl|loxAfr1|scaffold_13194 (23990-23849) | |
| 80-191, gnl|mm7|chr11 (31283214-31283350) | |
| 80-191, gnl|Mm7|chr11 (31283329-31283218) | |
| 80-191, gnl|monDom2|scaffold_7 (77377016-77377154) | |
| 80-191, gnl|oryCun1|scaffold_214704 (11150-11009) | |
| 80-191, gnl|rheMac2|chr2 (163809942-163810085) | |
| 80-191, gnl|rn3|chr15 (6687127-6687272) | |
| 80-191, gnl|tetNig1|chr3 (12772086-12771952) | |
| 80-191, gnl|xenTro1|scaffold_43 (813932-814067) | |
| 352-590, gnl|bosTau2|chr27 (29395157-29395392) | |
| 352-590, gnl|Hg17|chr3 (21453702-21453464) | |
| 760-871, gnl|bosTau2|chr27 (29411905-29412016) | |
| 760-871, gnl|Hg17|chr3 (21440568-21440457) | |
| 760-871, gnl|Mm7|chr2 (77257779-77257668) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ese (0.253004) | |
| tbr (0.154178) | |
| pla (0.133672) | |
| nmm (0.132802) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.253004) | |
| tbr (0.154178) | |
| pla (0.133672) | |
| nmm (0.132802) |