Non-Coding RNA Search

Ss1.1-Mixc-0029n13.5

Sequence:


               
               CGGCCGCTGCTACGCGCACTTCTCCGGCCTCGTATGCGCCTGCGCGCCCGGCTACATGGG
AGCGCGGTGCGAGTTCCCGGTTCACCCCGACGGCGCGGACGGCAGCGCGGGCGCGTTGCC
CGCGGCCTCGCCGGGTCTGAGGCACGGGGACCCACAGCGCTTTCTTCTGCCCCCGGCTTT
GGGACTGCTGGTGGCCGCGGGCTTGGCCGGCGCTGCGCTCTTGCTGGTTCACGTGAGACG
GCGTGGCCCTGGGCGAGATACTGGGTCTCGCTTGCTGGCGGGGACCCCGGAACCATCGGT
CCATGCGCTCCCTGATGCACTCAACAACATGAGGACCCAGGAGGGTTCCGAGGATGGGCC
AAGCCCGTCCTCAGATTGGAATCACGCCGAAGACGGAGACTCTTGTTCAGTTTATGTCAT
ATCTGCTCCTTCCATCTACGCTCGGGAGGCTTAACCTGCCCCTTCTCCATCAGCACTTGG
AGATGGAACCTGGATATTTTTGTATTCTCCGCTTCAGACATTTTGGCGTTCAAGGTGGAA
GGGGTGACTGGGAGAATTTTACCTCCGGAAGTTGTACGTAGTAATGGTTATTTATATCCT
TTTTTCCTCTCCCTGTCTTTCCTGAGACATCTATAAAGGCTCTTATTTTGATCAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCCGCTGCTACGCGCACTTCTCCGGCCTCGTATGCGCCTGCGCGCCCGGCTACATGGG
AGCGCGGTGCGAGTTCCCGGTTCACCCCGACGGCGCGGACGGCAGCGCGGGCGCGTTGCC
CGCGGCCTCGCCGGGTCTGAGGCACGGGGACCCACAGCGCTTTCTTCTGCCCCCGGCTTT
GGGACTGCTGGTGGCCGCGGGCTTGGCCGGCGCTGCGCTCTTGCTGGTTCACGTGAGACG
GCGTGGCCCTGGGCGAGATACTGGGTCTCGCTTGCTGGCGGGGACCCCGGAACCATCGGT
CCATGCGCTCCCTGATGCACTCAACAACATGAGGACCCAGGAGGGTTCCGAGGATGGGCC
AAGCCCGTCCTCAGATTGGAATCACGCCGAAGACGGAGACTCTTGTTCAGTTTATGTCAT
ATCTGCTCCTTCCATCTACGCTCGGGAGGCTTAACCTGCCCCTTCTCCATCAGCACTTGG
AGATGGAACCTGGATATTTTTGTATTCTCCGCTTCAGACATTTTGGCGTTCAAGGTGGAA
GGGGTGACTGGGAGAATTTTACCTCCGGAAGTTGTACGTAGTAATGGTTATTTATATCCT
TTTTTCCTCTCCCTGTCTTTCCTGAGACATCTATAAAGGCTCTTATTTTGATCAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

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               1-363, gnl|bosTau2|chr18 (43677526-43677176)
               

               
               1-363, gnl|Hg17|chr19 (44689748-44690098)
               

               
               1-363, gnl|Mm7|chr7 (25228592-25228242)
               


               
               447-654, gnl|bosTau2|chr18 (43676367-43676159)
               

               
               447-654, gnl|Hg17|chr19 (44690730-44690949)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-363, gnl|bosTau2|chr18 (43677526-43677176)
               

               
               1-363, gnl|Hg17|chr19 (44689748-44690098)
               

               
               1-363, gnl|Mm7|chr7 (25228592-25228242)
               


               
               447-654, gnl|bosTau2|chr18 (43676367-43676159)
               

               
               447-654, gnl|Hg17|chr19 (44690730-44690949)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.232504)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.232504)

	1-363, gnl\|bosTau2\|chr18 (43677526-43677176)
	1-363, gnl\|Hg17\|chr19 (44689748-44690098)
	1-363, gnl\|Mm7\|chr7 (25228592-25228242)

	447-654, gnl\|bosTau2\|chr18 (43676367-43676159)
	447-654, gnl\|Hg17\|chr19 (44690730-44690949)