Ss1.1-Mixc-0031a19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGCTGTTTGCTCCTACGGCTCGACACCCTGGGAAGCCTCGTTCTCAGATGGAAAACCA GCTGTGCGGTTTTCTTGAAACGCGGAGCGTATTCGTTGTTCATAACCTTCGGCGACCGAT GCCGGGAGCGGAGGCACCGAGGGCACCGACTGCTTCTGCCTTCGGCGGCGGATGCTCTCC TCCTGAGCCTGGCTGAAACGCTTCGTTAAGGGGCTCAGGCAGTACGGCAAGAACTTCTTC AGAATTAGAAAGGAGCTGCTTCCCAATAAGGAAACAAAAACCCTTTAATTGAAAAGCAGA TACTGGAAGAAAACCCCCGAGGCGGCCAGCTCCCGGGCACACCGCAGGCACCGCCGGCAG GCCGTGTTCAGGAGGATCAAGACCCGCACCGCGTCCACGCCCGTCAACACGCCCTCCAGA CCCCCATCCAGTGAATTCTTGGACCTGAGTTCTGCCAGCGAGGATGACTTCGACAGCGAG GACAGCGAGCAGGAGCTGAAGGGGTACGCGTGCCGCCACTGCTTCACCACCACCTCCAAG GACTGGCACCACGGGGGCCGGGAGAACATCCTGCTCTGCACCGACTGCCGCATTCATTTC AAGAAGTACGGCGAGCTGCCCCCCATCGAGAAGCCCGTGGACCCCCCACCATTTATGTTC AAACCTGTCAAAGAGGAGGAGGATGGGCTCAGCGGGAAACATAGCATGAGGACACGGCGG AGTCGTGGCTCGATGTCTACACTGCGCAGTGGTCGAAAGAAGCAGCCAGCCAGCCCTGAT GGTCGCGCCTCGCCCATCAATGAAGACATCCGCTCGAGCGGCCGGAACTCCCCCAGCGCT GCCAGCACCTCCAGCAATGACAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGCTGTTTGCTCCTACGGCTCGACACCCTGGGAAGCCTCGTTCTCAGATGGAAAACCA GCTGTGCGGTTTTCTTGAAACGCGGAGCGTATTCGTTGTTCATAACCTTCGGCGACCGAT GCCGGGAGCGGAGGCACCGAGGGCACCGACTGCTTCTGCCTTCGGCGGCGGATGCTCTCC TCCTGAGCCTGGCTGAAACGCTTCGTTAAGGGGCTCAGGCAGTACGGCAAGAACTTCTTC AGAATTAGAAAGGAGCTGCTTCCCAATAAGGAAACAAAAACCCTTTAATTGAAAAGCAGA TACTGGAAGAAAACCCCCGAGGCGGCCAGCTCCCGGGCACACCGCAGGCACCGCCGGCAG GCCGTGTTCAGGAGGATCAAGACCCGCACCGCGTCCACGCCCGTCAACACGCCCTCCAGA CCCCCATCCAGTGAATTCTTGGACCTGAGTTCTGCCAGCGAGGATGACTTCGACAGCGAG GACAGCGAGCAGGAGCTGAAGGGGTACGCGTGCCGCCACTGCTTCACCACCACCTCCAAG GACTGGCACCACGGGGGCCGGGAGAACATCCTGCTCTGCACCGACTGCCGCATTCATTTC AAGAAGTACGGCGAGCTGCCCCCCATCGAGAAGCCCGTGGACCCCCCACCATTTATGTTC AAACCTGTCAAAGAGGAGGAGGATGGGCTCAGCGGGAAACATAGCATGAGGACACGGCGG AGTCGTGGCTCGATGTCTACACTGCGCAGTGGTCGAAAGAAGCAGCCAGCCAGCCCTGAT GGTCGCGCCTCGCCCATCAATGAAGACATCCGCTCGAGCGGCCGGAACTCCCCCAGCGCT GCCAGCACCTCCAGCAATGACAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 301-439, gnl|bosTau2|chr16 (30487856-30487718) | |
| 301-439, gnl|canFam2|chr5 (64879177-64879315) | |
| 301-439, gnl|danRer3|chr23 (31491755-31491626) | |
| 301-439, gnl|dasNov1|scaffold_8596 (98977-98834) | |
| 301-439, gnl|echTel1|scaffold_55800 (4322-4179) | |
| 301-439, gnl|fr1|chrUn (45199618-45199747) | |
| 301-439, gnl|galGal2|chr21 (2902009-2902143) | |
| 301-439, gnl|hg17|chr1 (8360124-8360262) | |
| 301-439, gnl|Hg17|chr1 (8360276-8360138) | |
| 301-439, gnl|mm7|chr4 (149600575-149600436) | |
| 301-439, gnl|Mm7|chr4 (149600420-149600558) | |
| 301-439, gnl|monDom2|scaffold_148 (1451584-1451439) | |
| 301-439, gnl|panTro1|chr1 (8359028-8359166) | |
| 301-439, gnl|rheMac2|chr1 (11392413-11392551) | |
| 301-439, gnl|rn3|chr5 (167776808-167776669) | |
| 301-439, gnl|tetNig1|chr9 (2753914-2754043) | |
| 301-439, gnl|xenTro1|scaffold_464 (664489-664619) | |
| 512-735, gnl|bosTau2|chr16 (30486333-30486111) | |
| 512-735, gnl|canFam2|chr5 (64877535-64877751) | |
| 512-735, gnl|danRer3|chr23 (31493377-31493163) | |
| 512-735, gnl|dasNov1|scaffold_8596 (100784-100573) | |
| 512-735, gnl|echTel1|scaffold_55800 (5932-5698) | |
| 512-735, gnl|fr1|chrUn (45198815-45199019) | |
| 512-735, gnl|galGal2|chr21 (2899025-2899235) | |
| 512-735, gnl|hg17|chr1 (8358361-8358586) | |
| 512-735, gnl|Hg17|chr1 (8358597-8358379) | |
| 512-735, gnl|loxAfr1|scaffold_9570 (52416-52189) | |
| 512-735, gnl|mm7|chr4 (149602293-149602086) | |
| 512-735, gnl|Mm7|chr4 (149602069-149602291) | |
| 512-735, gnl|monDom2|scaffold_148 (1453456-1453227) | |
| 512-735, gnl|oryCun1|scaffold_195009 (20379-20158) | |
| 512-735, gnl|panTro1|chr1 (8357267-8357492) | |
| 512-735, gnl|rheMac2|chr1 (11390668-11390893) | |
| 512-735, gnl|rn3|chr5 (167778317-167778096) | |
| 512-735, gnl|tetNig1|chr9 (2753185-2753392) | |
| 512-735, gnl|xenTro1|scaffold_464 (662396-662629) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 301-439, gnl|bosTau2|chr16 (30487856-30487718) | |
| 301-439, gnl|canFam2|chr5 (64879177-64879315) | |
| 301-439, gnl|danRer3|chr23 (31491755-31491626) | |
| 301-439, gnl|dasNov1|scaffold_8596 (98977-98834) | |
| 301-439, gnl|echTel1|scaffold_55800 (4322-4179) | |
| 301-439, gnl|fr1|chrUn (45199618-45199747) | |
| 301-439, gnl|galGal2|chr21 (2902009-2902143) | |
| 301-439, gnl|hg17|chr1 (8360124-8360262) | |
| 301-439, gnl|Hg17|chr1 (8360276-8360138) | |
| 301-439, gnl|mm7|chr4 (149600575-149600436) | |
| 301-439, gnl|Mm7|chr4 (149600420-149600558) | |
| 301-439, gnl|monDom2|scaffold_148 (1451584-1451439) | |
| 301-439, gnl|panTro1|chr1 (8359028-8359166) | |
| 301-439, gnl|rheMac2|chr1 (11392413-11392551) | |
| 301-439, gnl|rn3|chr5 (167776808-167776669) | |
| 301-439, gnl|tetNig1|chr9 (2753914-2754043) | |
| 301-439, gnl|xenTro1|scaffold_464 (664489-664619) | |
| 512-735, gnl|bosTau2|chr16 (30486333-30486111) | |
| 512-735, gnl|canFam2|chr5 (64877535-64877751) | |
| 512-735, gnl|danRer3|chr23 (31493377-31493163) | |
| 512-735, gnl|dasNov1|scaffold_8596 (100784-100573) | |
| 512-735, gnl|echTel1|scaffold_55800 (5932-5698) | |
| 512-735, gnl|fr1|chrUn (45198815-45199019) | |
| 512-735, gnl|galGal2|chr21 (2899025-2899235) | |
| 512-735, gnl|hg17|chr1 (8358361-8358586) | |
| 512-735, gnl|Hg17|chr1 (8358597-8358379) | |
| 512-735, gnl|loxAfr1|scaffold_9570 (52416-52189) | |
| 512-735, gnl|mm7|chr4 (149602293-149602086) | |
| 512-735, gnl|Mm7|chr4 (149602069-149602291) | |
| 512-735, gnl|monDom2|scaffold_148 (1453456-1453227) | |
| 512-735, gnl|oryCun1|scaffold_195009 (20379-20158) | |
| 512-735, gnl|panTro1|chr1 (8357267-8357492) | |
| 512-735, gnl|rheMac2|chr1 (11390668-11390893) | |
| 512-735, gnl|rn3|chr5 (167778317-167778096) | |
| 512-735, gnl|tetNig1|chr9 (2753185-2753392) | |
| 512-735, gnl|xenTro1|scaffold_464 (662396-662629) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) |