Ss1.1-Mixc-0031d14.5
|
GCTCTGAGCCTAGCACCCATGGGTCTCCGGGTCCGGGGGACCGGGGTCACCCAGCTCCCG
TTCCCTGCCCCCTCCCCAGGATGGAAGAGACCCCGGGAGTCCTGCATGGCGGTTCACTGC
ATGTGCTGCCCCGCACTTTGGGCTGCTCTGCCGCTGTCCTACTTCCATCCCATAGCTCCT
GCTGAACCGAGACCCTCTGACCACTTGCCAGCTCACTGGCCACAAGCTGCAGTGTAGCAC
TGAAGAGAACCACCCAACGCTCAAGCCTTACGACCTGAGAAGGACTTCAGCAACCACCAC
CTCCCTCTCGCACGCTTCCCTGCCGACTCCCCACAGATGGCTCTGTTCCTACGCAGCCTG
GCGGGTCTACCCCACGGAAACTGTGATGTCCCCAACAAGCCTCCCCTAGGCCTAGACTAA
GACCAGACATTGGAGAAAGAAGCCGCTGCTCAGCTCTCCTGGCTGGGCCACCCTCCCAGG
TGCAGCGCGGCCCTCGCTGCTTCCCTCTGTCCTCAGCAGCACCACGGGCCTGGCAGCTGG
GAAAGAACCAACCCGAGGCTTTGCAGTTGGCAAGCTACCTAGCGGCCTTACTTCTGCCTT
TAATCTCCTTCAAGGCCTCTCTCGCTTCTTGGGCTCCACTGAGGCACATCCTAGGTAGGC
TGACAGGTAGACCTGTTCCCACCACAGCAGGTGAACGTGGTCCAACCCCCTGTGTCCACC
GTTCGGATCACTTTCCAGATTGCCACCTGGCCCGAGTCCTGGCTCCTTCCTGCTCGTCCT
CTTAACCTAAGTGCTTTCTTGTTGGAAACGCCCATGCCCCTTCACCCGTGTCATGCTGTG
TGTTTCATGCGTTGCTTGGTCTTTGGGTCACACTGCATCCCCTCCCTTCTCCAGGGCAGA
TCTGACTGAATGTTTGCTGAAGTTTTTTCTGTCTCTTGGTCCACAAGTATTTGGAAAGGT
CACTAAAAATTGGTGTTTCAGTCTTGGCATTTCATTTAGGATCTCCATGAGAAAGGGGCT
TCTTGGCCCTGAAAGTGTATATTGTGTGTCTCATTTGTGAAATGCTTCCTGCTCTAGAAC
TAGCTCAAAGACTGTACATATTTACAAGAAACTTTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTCTGAGCCTAGCACCCATGGGTCTCCGGGTCCGGGGGACCGGGGTCACCCAGCTCCCG
TTCCCTGCCCCCTCCCCAGGATGGAAGAGACCCCGGGAGTCCTGCATGGCGGTTCACTGC
ATGTGCTGCCCCGCACTTTGGGCTGCTCTGCCGCTGTCCTACTTCCATCCCATAGCTCCT
GCTGAACCGAGACCCTCTGACCACTTGCCAGCTCACTGGCCACAAGCTGCAGTGTAGCAC
TGAAGAGAACCACCCAACGCTCAAGCCTTACGACCTGAGAAGGACTTCAGCAACCACCAC
CTCCCTCTCGCACGCTTCCCTGCCGACTCCCCACAGATGGCTCTGTTCCTACGCAGCCTG
GCGGGTCTACCCCACGGAAACTGTGATGTCCCCAACAAGCCTCCCCTAGGCCTAGACTAA
GACCAGACATTGGAGAAAGAAGCCGCTGCTCAGCTCTCCTGGCTGGGCCACCCTCCCAGG
TGCAGCGCGGCCCTCGCTGCTTCCCTCTGTCCTCAGCAGCACCACGGGCCTGGCAGCTGG
GAAAGAACCAACCCGAGGCTTTGCAGTTGGCAAGCTACCTAGCGGCCTTACTTCTGCCTT
TAATCTCCTTCAAGGCCTCTCTCGCTTCTTGGGCTCCACTGAGGCACATCCTAGGTAGGC
TGACAGGTAGACCTGTTCCCACCACAGCAGGTGAACGTGGTCCAACCCCCTGTGTCCACC
GTTCGGATCACTTTCCAGATTGCCACCTGGCCCGAGTCCTGGCTCCTTCCTGCTCGTCCT
CTTAACCTAAGTGCTTTCTTGTTGGAAACGCCCATGCCCCTTCACCCGTGTCATGCTGTG
TGTTTCATGCGTTGCTTGGTCTTTGGGTCACACTGCATCCCCTCCCTTCTCCAGGGCAGA
TCTGACTGAATGTTTGCTGAAGTTTTTTCTGTCTCTTGGTCCACAAGTATTTGGAAAGGT
CACTAAAAATTGGTGTTTCAGTCTTGGCATTTCATTTAGGATCTCCATGAGAAAGGGGCT
TCTTGGCCCTGAAAGTGTATATTGTGTGTCTCATTTGTGAAATGCTTCCTGCTCTAGAAC
TAGCTCAAAGACTGTACATATTTACAAGAAACTTTA
|
|
134-459, gnl|bosTau2|chr17 (30583172-30583500) |
|
134-459, gnl|canFam2|chr26 (18746734-18747326) |
|
134-459, gnl|dasNov1|scaffold_1999 (173703-173097) |
|
134-459, gnl|galGal2|chr15 (9559671-9559171) |
|
134-459, gnl|hg17|chr12 (118587312-118587904) |
|
134-459, gnl|Hg17|chr12 (118587744-118587395) |
|
134-459, gnl|loxAfr1|scaffold_1285 (61069-60456) |
|
134-459, gnl|mm7|chr5 (115237391-115236752) |
|
134-459, gnl|Mm7|chr5 (115236923-115237310) |
|
134-459, gnl|monDom2|scaffold_101 (669188-668690) |
|
134-459, gnl|oryCun1|scaffold_191138 (133448-132848) |
|
134-459, gnl|panTro1|chr10 (121586104-121586696) |
|
134-459, gnl|rheMac2|chr11 (120671850-120672447) |
|
134-459, gnl|rn3|chr12 (41720020-41720646) |
| |
|
649-1116, gnl|bosTau2|chr17 (30583566-30584050) |
|
649-1116, gnl|Hg17|chr12 (118587313-118586678) |
|
649-1116, gnl|Mm7|chr5 (115237611-115238047) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
134-459, gnl|bosTau2|chr17 (30583172-30583500) |
|
134-459, gnl|canFam2|chr26 (18746734-18747326) |
|
134-459, gnl|dasNov1|scaffold_1999 (173703-173097) |
|
134-459, gnl|galGal2|chr15 (9559671-9559171) |
|
134-459, gnl|hg17|chr12 (118587312-118587904) |
|
134-459, gnl|Hg17|chr12 (118587744-118587395) |
|
134-459, gnl|loxAfr1|scaffold_1285 (61069-60456) |
|
134-459, gnl|mm7|chr5 (115237391-115236752) |
|
134-459, gnl|Mm7|chr5 (115236923-115237310) |
|
134-459, gnl|monDom2|scaffold_101 (669188-668690) |
|
134-459, gnl|oryCun1|scaffold_191138 (133448-132848) |
|
134-459, gnl|panTro1|chr10 (121586104-121586696) |
|
134-459, gnl|rheMac2|chr11 (120671850-120672447) |
|
134-459, gnl|rn3|chr12 (41720020-41720646) |
| |
|
649-1116, gnl|bosTau2|chr17 (30583566-30584050) |
|
649-1116, gnl|Hg17|chr12 (118587313-118586678) |
|
649-1116, gnl|Mm7|chr5 (115237611-115238047) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
eli (0.151814) |
|
ssp (0.13552) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
eli (0.151814) |
|
ssp (0.13552) |
