Non-Coding RNA Search

Ss1.1-Mixc-0031g01.5

Sequence:


               
               AGATTTATAGGCCAGGGCATGTGGATGTGTCTGCTAATGTAAACTTTGTCATGGTTTCCA
TTTACTAACAGCAACAGCAAGAAATAAATCAGAGGGCAAGGCACTGGGGGTGAGTCCCGT
CCGACATTCCGGAGGTTAGGCAGGCTGCTAACCTGAAGGCAGGATGTAGCGCCACCAGGC
AGCTTTGAAAACGCCAGCATTTCAAGCAGCTGAAAAAAAGAATCAGCACTAACCAGCACC
TCTGCACAGATCTCTAAAGGAATCTTCCCATTCAGTGTAACTCAGTGTTAACAGGAGCAC
AGTGCTCTTAAGAAACTGTGCTTGAAGATCTGAGATTTTGTTTGGGGGTTTCTTCTTGAC
TTTTCGGAGTTGTAATCATAGGCATCTTCAGAGATGCACATATCTCCTCACACAAAGGAA
GTGGAATTCATTTTCATCATCTGGGGGGTGTCCTTAGAATGTACAGACCACGCTGGTTAT
GGGGCTTCAAGTTGTTAAAAATTAAGGTGACTCTAAAAGGAAATAAGGGCTGGTCCAGGA
TCTCCCACTGATAAGACTGTTCCTAATAACTTAAGTAACTTTGGGTCTACAAGTATATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATTTATAGGCCAGGGCATGTGGATGTGTCTGCTAATGTAAACTTTGTCATGGTTTCCA
TTTACTAACAGCAACAGCAAGAAATAAATCAGAGGGCAAGGCACTGGGGGTGAGTCCCGT
CCGACATTCCGGAGGTTAGGCAGGCTGCTAACCTGAAGGCAGGATGTAGCGCCACCAGGC
AGCTTTGAAAACGCCAGCATTTCAAGCAGCTGAAAAAAAGAATCAGCACTAACCAGCACC
TCTGCACAGATCTCTAAAGGAATCTTCCCATTCAGTGTAACTCAGTGTTAACAGGAGCAC
AGTGCTCTTAAGAAACTGTGCTTGAAGATCTGAGATTTTGTTTGGGGGTTTCTTCTTGAC
TTTTCGGAGTTGTAATCATAGGCATCTTCAGAGATGCACATATCTCCTCACACAAAGGAA
GTGGAATTCATTTTCATCATCTGGGGGGTGTCCTTAGAATGTACAGACCACGCTGGTTAT
GGGGCTTCAAGTTGTTAAAAATTAAGGTGACTCTAAAAGGAAATAAGGGCTGGTCCAGGA
TCTCCCACTGATAAGACTGTTCCTAATAACTTAAGTAACTTTGGGTCTACAAGTATATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-600, gnl|bosTau2|chr15 (38137685-38137109)
               

               
               3-600, gnl|Hg17|chr11 (32366795-32366210)
               

               
               3-600, gnl|Mm7|chr2 (105023515-105024113)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-600, gnl|bosTau2|chr15 (38137685-38137109)
               

               
               3-600, gnl|Hg17|chr11 (32366795-32366210)
               

               
               3-600, gnl|Mm7|chr2 (105023515-105024113)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	3-600, gnl\|bosTau2\|chr15 (38137685-38137109)
	3-600, gnl\|Hg17\|chr11 (32366795-32366210)
	3-600, gnl\|Mm7\|chr2 (105023515-105024113)