Non-Coding RNA Search

Ss1.1-Mixc-0031j19.5

Sequence:


               
               TCGATCCCTGGCCTCGCTCAGTGGGTTAAGGATTGGGCGTTGTGTTGAAACTAAGTGAGG
GGCCAGGATGGTGACAGCCTAAAGGACTCTGTTTGGAAGAGGTTTTTAATGGTATTTATT
AATTTTTTTATTTTTTAAAATGTTTGCTTCCTGAAGTGGGATCTGTAGTCCAAAGCTTAA
GCTGATGGGTTAAGTTTTAAGCCTGGGCAAATATACTTCAAGCTGAAGTGTTTTAAGAAT
CCTAATATGAGAAGGTGAATACATCATTCTTCCCTGGTGGGGGGCGAGGGGGCAGAATTC
CATTGTCACAAAGCAGGTGGCTCTCCCTGGCTGCTCTCCCCCCTCCCTGTAGGTCCCCGA
GGAACTCGGGGTGAGCGTCAGTATTATTCAGATCATGGGTCCTCACTGAAACCAAGGCCT
CCTGGGGTGTGTGCTTCGTGAGGTTTTGAGAGAACTGCAGTTTTCATGAGCATTTCTTAA
TGCTTTGTATGACTTTTGTGCAATTATAGAAGTTCAATTTGAACAAAATGCTGTTACTTT
TTACGGCCCTATCGACTAAAGCTAGATAAGTTATTCCCTAACAAGGGAGGAGCCTTTGTT
ACTGTCATTTTAAAAATAAACTACAAAACAACAAGAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGATCCCTGGCCTCGCTCAGTGGGTTAAGGATTGGGCGTTGTGTTGAAACTAAGTGAGG
GGCCAGGATGGTGACAGCCTAAAGGACTCTGTTTGGAAGAGGTTTTTAATGGTATTTATT
AATTTTTTTATTTTTTAAAATGTTTGCTTCCTGAAGTGGGATCTGTAGTCCAAAGCTTAA
GCTGATGGGTTAAGTTTTAAGCCTGGGCAAATATACTTCAAGCTGAAGTGTTTTAAGAAT
CCTAATATGAGAAGGTGAATACATCATTCTTCCCTGGTGGGGGGCGAGGGGGCAGAATTC
CATTGTCACAAAGCAGGTGGCTCTCCCTGGCTGCTCTCCCCCCTCCCTGTAGGTCCCCGA
GGAACTCGGGGTGAGCGTCAGTATTATTCAGATCATGGGTCCTCACTGAAACCAAGGCCT
CCTGGGGTGTGTGCTTCGTGAGGTTTTGAGAGAACTGCAGTTTTCATGAGCATTTCTTAA
TGCTTTGTATGACTTTTGTGCAATTATAGAAGTTCAATTTGAACAAAATGCTGTTACTTT
TTACGGCCCTATCGACTAAAGCTAGATAAGTTATTCCCTAACAAGGGAGGAGCCTTTGTT
ACTGTCATTTTAAAAATAAACTACAAAACAACAAGAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               43-631, gnl|bosTau2|chr5 (70867259-70867820)
               

               
               43-631, gnl|Hg17|chr22 (39652761-39653317)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               43-631, gnl|bosTau2|chr5 (70867259-70867820)
               

               
               43-631, gnl|Hg17|chr22 (39652761-39653317)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               eye (0.170503)
               

               
               lun (0.150489)
               

               
               nmm (0.132802)
               

               
               ebs (0.118301)
               

               
               med (0.116252)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               lun (0.150489)
               

               
               nmm (0.132802)
               

               
               ebs (0.118301)
               

               
               med (0.116252)

	43-631, gnl\|bosTau2\|chr5 (70867259-70867820)
	43-631, gnl\|Hg17\|chr22 (39652761-39653317)

	eye (0.170503)
	lun (0.150489)
	nmm (0.132802)
	ebs (0.118301)
	med (0.116252)