Ss1.1-Mixc-0031k15.3
|
CGGCCGCGCTCCACCTCCACAAGCTCAAGTACAACAGCCCCTGGAAGGACTCGCGCGGCG
ACATCTCGCTCATCCTCAGCGAGTTCGCCGAGTTCAACAAGGTGCTGCTCGGCAGCGGCA
GCCAGGCCGCCCCCCGAGACCCAGAGCCCAGCGAGGCCGCGGCCCCGGCGCCGGGCCCGC
CCTGCCCGCGGCCCGCCTCCTACGAGGACCTGGTGGCCGACCTGTGCGCCAGTCTGCGCG
TCAAGCTCGAGCGGGTGGTGAAGGAGGCCTGCGCCAGAACCTTCCTCTTCCACCTGGTGG
AGACAGCCGACGAGTCGTTCTTCCTAAGGACGAAGAATCTTCTGCGGAAGGGAGGCCACG
CCGAGATGGAGCCTCAGCGTTTCTGTCAAGCTTTTCCCAGAGAGAACGACACGCTCCTCG
TCATCATCAGAAACGAAGACATCGCGTCCCACTTGCACCAGATCCCGGCCCTGCTGCGGC
TGAAGCGCTTGCCCGGCGTGCTCTTCGCCGGCGTGGACAGCCCGGAGGACGTCCTCCACC
ACACCTACCAGGAGCTCTTCCGGGCCGGCGGCTTCGTGGTGTCGGACGGCAGGATCCTGG
ACAGCGTCTCCTTGGTTCAGCTGAAGGAGATTGTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGGCCGCGCTCCACCTCCACAAGCTCAAGTACAACAGCCCCTGGAAGGACTCGCGCGGCG
ACATCTCGCTCATCCTCAGCGAGTTCGCCGAGTTCAACAAGGTGCTGCTCGGCAGCGGCA
GCCAGGCCGCCCCCCGAGACCCAGAGCCCAGCGAGGCCGCGGCCCCGGCGCCGGGCCCGC
CCTGCCCGCGGCCCGCCTCCTACGAGGACCTGGTGGCCGACCTGTGCGCCAGTCTGCGCG
TCAAGCTCGAGCGGGTGGTGAAGGAGGCCTGCGCCAGAACCTTCCTCTTCCACCTGGTGG
AGACAGCCGACGAGTCGTTCTTCCTAAGGACGAAGAATCTTCTGCGGAAGGGAGGCCACG
CCGAGATGGAGCCTCAGCGTTTCTGTCAAGCTTTTCCCAGAGAGAACGACACGCTCCTCG
TCATCATCAGAAACGAAGACATCGCGTCCCACTTGCACCAGATCCCGGCCCTGCTGCGGC
TGAAGCGCTTGCCCGGCGTGCTCTTCGCCGGCGTGGACAGCCCGGAGGACGTCCTCCACC
ACACCTACCAGGAGCTCTTCCGGGCCGGCGGCTTCGTGGTGTCGGACGGCAGGATCCTGG
ACAGCGTCTCCTTGGTTCAGCTGAAGGAGATTGTCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-335, gnl|bosTau2|chr13 (27811557-27811895) |
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3-335, gnl|canFam2|chr2 (33026414-33026043) |
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3-335, gnl|dasNov1|scaffold_2134 (22899-22525) |
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3-335, gnl|echTel1|scaffold_307889 (50355-50002) |
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3-335, gnl|galGal2|chr14 (14958130-14957750) |
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3-335, gnl|hg17|chr10 (5831508-5831879) |
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3-335, gnl|Hg17|chr10 (5831652-5831996) |
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3-335, gnl|loxAfr1|scaffold_8356 (105457-105828) |
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3-335, gnl|mm7|chr13 (3458343-3457975) |
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3-335, gnl|Mm7|chr13 (3458194-3457856) |
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3-335, gnl|monDom2|scaffold_31 (28948861-28949244) |
|
3-335, gnl|oryCun1|scaffold_204525 (61936-62307) |
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3-335, gnl|panTro1|chr8 (5914134-5914505) |
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3-335, gnl|rheMac2|chr9 (6023853-6024224) |
|
3-335, gnl|rn3|chr17 (77844853-77845224) |
|
3-335, gnl|xenTro1|scaffold_20 (416317-415922) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-335, gnl|bosTau2|chr13 (27811557-27811895) |
|
3-335, gnl|canFam2|chr2 (33026414-33026043) |
|
3-335, gnl|dasNov1|scaffold_2134 (22899-22525) |
|
3-335, gnl|echTel1|scaffold_307889 (50355-50002) |
|
3-335, gnl|galGal2|chr14 (14958130-14957750) |
|
3-335, gnl|hg17|chr10 (5831508-5831879) |
|
3-335, gnl|Hg17|chr10 (5831652-5831996) |
|
3-335, gnl|loxAfr1|scaffold_8356 (105457-105828) |
|
3-335, gnl|mm7|chr13 (3458343-3457975) |
|
3-335, gnl|Mm7|chr13 (3458194-3457856) |
|
3-335, gnl|monDom2|scaffold_31 (28948861-28949244) |
|
3-335, gnl|oryCun1|scaffold_204525 (61936-62307) |
|
3-335, gnl|panTro1|chr8 (5914134-5914505) |
|
3-335, gnl|rheMac2|chr9 (6023853-6024224) |
|
3-335, gnl|rn3|chr17 (77844853-77845224) |
|
3-335, gnl|xenTro1|scaffold_20 (416317-415922) |
|
pty (0.142714) |
|
cst (0.140036) |
|
med (0.116252) |
|
jca (0.11396) |
|
pty (0.142714) |
|
cst (0.140036) |
|
med (0.116252) |
|
jca (0.11396) |
