Non-Coding RNA Search

Ss1.1-Mixc-0032,c13.3

Sequence:


               
               GTACTTGTTGTGACTTACAGTGACTTAAAGCGATGCTTTGAAAATACTTTTCAAGAACTG
ATTGCAGCTGCAAATGGTCAGTTGTAGTATTTGCCGAAAAAACAAACAAACAAAAACAGG
CGGGATATGGCTGAGGAGCTTAACCTAGAGCAAATTGCACTACAGCTGAACTGTTCTCAT
CGTCTCATGTCACGTCTGGGAAACAGGCAGAAGATGAGCAGAGCTGCTTGCACTTGGGTC
AGGTGCGCTGTTACTTGAAAGGAAGAATGTTTCGCTTGCCCTGGCGCTGTGGCTGCTGGT
GGGGCCACGTCCGTGAAGACCTGCTTTTAGCTTAAGGAGCCCCATGAGGGGAATGATGTT
CCAGTTTTCATTTTTTCCACTTGTATATGCACTAATTTTAATTTTTTTAAAGACTTTTTT
CGGATCTTTGAACTTTTGCCACATTGTATACTTATTAAGGGAAACATTTGCAAAGACATT
TTGGGCAGCATTTTTGTCACTCAGGGGGGCGGAATGTGCTCTTCGGGGGATGGGTTGCCC
TGACCACCGTGATTTCCTGGGAGTACAGTCTAGTGCTTGATTCTCCTCAGAGTACTGTAT
GCCAGCTCCGTATGCCACCCGCTGTTACTTCAAGTGCAGATTTGTGTTTGGTGTTTCCGT
TTTGTGTTTCAGAACACACAAAGAGCACGACCAGTGCGTTGGTGGATATGAATCCCCCTC
CCCCCGCCCCCGTCGATTTAAATCTTCTCTGAATGAGGGTCTGATAAACAGTAACCGAAG
GAGCCCGTGGAGCTCTTTCCTCCAAATTCCGCCAGAGCCTTTTTAAAAAAGAGGCGTTTC
CCTGCTAATCAGATGTATTTCCATGTATGCCATTTTTTTTAATGGAAGAAAATTCAGAAA
TTGTGTTAAAGGCCTGAAGTTGAGGCGTCGATTGCTTTAGGCTCTTGCCAGCCCGCCTTG
TTTGTATAAAGTTCTGTTCTCTGAACCACAGCTTTATGACGGTACTTTACACTGGATGCA
GACAGAGAGACGGAAGGTGCGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACTTGTTGTGACTTACAGTGACTTAAAGCGATGCTTTGAAAATACTTTTCAAGAACTG
ATTGCAGCTGCAAATGGTCAGTTGTAGTATTTGCCGAAAAAACAAACAAACAAAAACAGG
CGGGATATGGCTGAGGAGCTTAACCTAGAGCAAATTGCACTACAGCTGAACTGTTCTCAT
CGTCTCATGTCACGTCTGGGAAACAGGCAGAAGATGAGCAGAGCTGCTTGCACTTGGGTC
AGGTGCGCTGTTACTTGAAAGGAAGAATGTTTCGCTTGCCCTGGCGCTGTGGCTGCTGGT
GGGGCCACGTCCGTGAAGACCTGCTTTTAGCTTAAGGAGCCCCATGAGGGGAATGATGTT
CCAGTTTTCATTTTTTCCACTTGTATATGCACTAATTTTAATTTTTTTAAAGACTTTTTT
CGGATCTTTGAACTTTTGCCACATTGTATACTTATTAAGGGAAACATTTGCAAAGACATT
TTGGGCAGCATTTTTGTCACTCAGGGGGGCGGAATGTGCTCTTCGGGGGATGGGTTGCCC
TGACCACCGTGATTTCCTGGGAGTACAGTCTAGTGCTTGATTCTCCTCAGAGTACTGTAT
GCCAGCTCCGTATGCCACCCGCTGTTACTTCAAGTGCAGATTTGTGTTTGGTGTTTCCGT
TTTGTGTTTCAGAACACACAAAGAGCACGACCAGTGCGTTGGTGGATATGAATCCCCCTC
CCCCCGCCCCCGTCGATTTAAATCTTCTCTGAATGAGGGTCTGATAAACAGTAACCGAAG
GAGCCCGTGGAGCTCTTTCCTCCAAATTCCGCCAGAGCCTTTTTAAAAAAGAGGCGTTTC
CCTGCTAATCAGATGTATTTCCATGTATGCCATTTTTTTTAATGGAAGAAAATTCAGAAA
TTGTGTTAAAGGCCTGAAGTTGAGGCGTCGATTGCTTTAGGCTCTTGCCAGCCCGCCTTG
TTTGTATAAAGTTCTGTTCTCTGAACCACAGCTTTATGACGGTACTTTACACTGGATGCA
GACAGAGAGACGGAAGGTGCGGAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-1031, gnl|bosTau2|chr12 (14922534-14923576)
               

               
               1-1031, gnl|Hg17|chr13 (27764573-27765636)
               

               
               1-1031, gnl|Mm7|chr5 (146440064-146441051)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1031, gnl|bosTau2|chr12 (14922534-14923576)
               

               
               1-1031, gnl|Hg17|chr13 (27764573-27765636)
               

               
               1-1031, gnl|Mm7|chr5 (146440064-146441051)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	1-1031, gnl\|bosTau2\|chr12 (14922534-14923576)
	1-1031, gnl\|Hg17\|chr13 (27764573-27765636)
	1-1031, gnl\|Mm7\|chr5 (146440064-146441051)