Non-Coding RNA Search

Ss1.1-Mixc-0032e23.5

Sequence:


               
               AGATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCCAGCTTTGGCCGACCGGCCCTGTGT
GGGTGGCTGTACAGGGAGCCGGTACTGTGAGCCCCAAATCACTGTCAAGTTTGCAAAGTT
TAAGGGACAGAAGGGTGAGGGGGCTTGGAGAGGAAAGGAACCTGGTAAGAGGAAAAGGTG
ATGGGGAAAGATAATGTGGAAGGGCATTGCAAGCAGGCGCAGCCCCCACGCCCACCGTCG
TCCCCGCCCCACACACCCACGCCCGCATGCGCATTCCACATCCTCAGCAGCCACCTGACC
AAAGAGAACCGGCGCTCCAAAGAAAAGTCACTCCCCAGCCCCAGCCTCCCCGCCCCAAAA
AGCAGGATTTGCCGTTCCCCAAGCGTGGCGCTGCCACCGTTGCAATTCCCAGAATGCTCT
TTGCCCTTTCTCGTGGTCACCATCCATTAGTCATGTTTGCTTTAATGAGTTACATGCCCA
TCAGCCACGGGTTATCACCACCTTTGCGGATGGGTCTGTGGGGTGACGTTTCTTCCATCC
CCACTCTGATAAGGACCAGCTAATAGCCAGGAAGTAAGTAGCTCCGGTTTCCAGCCTCTC
AGGCTGTCTGCGTCCTCGAGCATTTCAGCAGGGGCAGGTGCCGTGGACTACCCCTTCTGG
AGGCATCATACAGACTCCTGGCCCTCATCCATCCCTACCCCTGGAAGCTGACTCCTTGCG
GAGTTCTTTTCTGTGAGCTCAGTGACAAGGTCTGTGCGAGATGCAGGTTCCTGTGCAAAT
TCATGCATATTTTGATTTTCATAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCCAGCTTTGGCCGACCGGCCCTGTGT
GGGTGGCTGTACAGGGAGCCGGTACTGTGAGCCCCAAATCACTGTCAAGTTTGCAAAGTT
TAAGGGACAGAAGGGTGAGGGGGCTTGGAGAGGAAAGGAACCTGGTAAGAGGAAAAGGTG
ATGGGGAAAGATAATGTGGAAGGGCATTGCAAGCAGGCGCAGCCCCCACGCCCACCGTCG
TCCCCGCCCCACACACCCACGCCCGCATGCGCATTCCACATCCTCAGCAGCCACCTGACC
AAAGAGAACCGGCGCTCCAAAGAAAAGTCACTCCCCAGCCCCAGCCTCCCCGCCCCAAAA
AGCAGGATTTGCCGTTCCCCAAGCGTGGCGCTGCCACCGTTGCAATTCCCAGAATGCTCT
TTGCCCTTTCTCGTGGTCACCATCCATTAGTCATGTTTGCTTTAATGAGTTACATGCCCA
TCAGCCACGGGTTATCACCACCTTTGCGGATGGGTCTGTGGGGTGACGTTTCTTCCATCC
CCACTCTGATAAGGACCAGCTAATAGCCAGGAAGTAAGTAGCTCCGGTTTCCAGCCTCTC
AGGCTGTCTGCGTCCTCGAGCATTTCAGCAGGGGCAGGTGCCGTGGACTACCCCTTCTGG
AGGCATCATACAGACTCCTGGCCCTCATCCATCCCTACCCCTGGAAGCTGACTCCTTGCG
GAGTTCTTTTCTGTGAGCTCAGTGACAAGGTCTGTGCGAGATGCAGGTTCCTGTGCAAAT
TCATGCATATTTTGATTTTCATAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-796, gnl|bosTau2|chr3 (5174693-5173890)
               

               
               1-796, gnl|Hg17|chr1 (154879257-154880108)
               

               
               1-796, gnl|Mm7|chr3 (87194803-87193987)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-796, gnl|bosTau2|chr3 (5174693-5173890)
               

               
               1-796, gnl|Hg17|chr1 (154879257-154880108)
               

               
               1-796, gnl|Mm7|chr3 (87194803-87193987)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               clu (0.119646)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)
               

               
               eje (0.0988338)

	1-796, gnl\|bosTau2\|chr3 (5174693-5173890)
	1-796, gnl\|Hg17\|chr1 (154879257-154880108)
	1-796, gnl\|Mm7\|chr3 (87194803-87193987)