Non-Coding RNA Search

Ss1.1-Mixc-0032g21.3

Sequence:


               
               GCTGCTATGCATGGAGTAGAAGTGGAGAGCTGAAAGCAAGTTGGGTCTGAGCTGGTGATT
CCCCACTGATGGAAAAGCAGTTTGATGTGGTGGCTTCAGCTGAATGTGGTTAGAGGAATA
GGCCGAAGAGCTGTGTTCCATTTTCTGAAACACCAGTGCTTTGGGAAGCCGGGGGTGCTT
CCCAGAGAAGAATAGGGAGCTGGGCTGGAGCCACACGTGAGGCTGCTTCCCCACCAGTGC
TGGCACCTTTGCTAGCCCTGATCTCGTCTGCAAACTCAGTGTGGGTTGCATGGTTCAGCC
AACCACTCAAAGCTATTTATTCATTGAAGAAATAACTTATTTTCTCTCAAACCGTAATTT
GTAACTCTTTGTACTACTATGGAGTTCCCTCCAGAAACATGGGCATAATTCAAGTCAGCA
TTGGAGGACCAAAGACTTCTGGCCAGTTAGGGAGTTGAGCGTTTGCCCTGGGGAAGGAAA
TTCCGCGCGTCTTATTTATCACGGCTGTGGCGTGGGTCCTGCAGGGGGATGTATCCAGGG
CTGTGCCTTTTAACTGCTACGTGTGGAACTGTGATCTTCCTCATCTGCTTTTGAGCATCT
TGGTTTGGGATGAAGTGAGGAGAACACAGGTAAAAACTTGGAGCTCAGTGGCACCCACAT
TTCTGGAAATGCTGCAGCCTCTGGGAAGAGCCTATCCTGGGCATGGTTGTTGCTTCAAGG
TTCTCTGATCTCTTAGGAATGTACCTAATCCTTATTCTTAGGTAACTCTCATCCTCACAG
TTTTAAGTGCAAACTCCTGAGTCCCGTGGTGGTCTGCACGAGTCCCCATCTCCCTACTGC
AGCAAGAACACTCGTCAGGCGCGATGCCACTTAGGAGTTCACCTGCACTCATCTCATGAG
AGAGAGACAAAAAGAATTCCGGGTTTTGTCAGTAGAGGCCAACGTAAAATTTCAGAGCAT
TACCTTTTAGCAATCTTGGGTCTTGCCTCTCCCAGTGCAACCAAACAGCCATCTGTGCCT
TGTGGCCTCACCTCTACACTGGAGGGCTCCAAGCTCCTGAATTCAGCTCACCTGAGCCAG
CAGGCTGGGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCTATGCATGGAGTAGAAGTGGAGAGCTGAAAGCAAGTTGGGTCTGAGCTGGTGATT
CCCCACTGATGGAAAAGCAGTTTGATGTGGTGGCTTCAGCTGAATGTGGTTAGAGGAATA
GGCCGAAGAGCTGTGTTCCATTTTCTGAAACACCAGTGCTTTGGGAAGCCGGGGGTGCTT
CCCAGAGAAGAATAGGGAGCTGGGCTGGAGCCACACGTGAGGCTGCTTCCCCACCAGTGC
TGGCACCTTTGCTAGCCCTGATCTCGTCTGCAAACTCAGTGTGGGTTGCATGGTTCAGCC
AACCACTCAAAGCTATTTATTCATTGAAGAAATAACTTATTTTCTCTCAAACCGTAATTT
GTAACTCTTTGTACTACTATGGAGTTCCCTCCAGAAACATGGGCATAATTCAAGTCAGCA
TTGGAGGACCAAAGACTTCTGGCCAGTTAGGGAGTTGAGCGTTTGCCCTGGGGAAGGAAA
TTCCGCGCGTCTTATTTATCACGGCTGTGGCGTGGGTCCTGCAGGGGGATGTATCCAGGG
CTGTGCCTTTTAACTGCTACGTGTGGAACTGTGATCTTCCTCATCTGCTTTTGAGCATCT
TGGTTTGGGATGAAGTGAGGAGAACACAGGTAAAAACTTGGAGCTCAGTGGCACCCACAT
TTCTGGAAATGCTGCAGCCTCTGGGAAGAGCCTATCCTGGGCATGGTTGTTGCTTCAAGG
TTCTCTGATCTCTTAGGAATGTACCTAATCCTTATTCTTAGGTAACTCTCATCCTCACAG
TTTTAAGTGCAAACTCCTGAGTCCCGTGGTGGTCTGCACGAGTCCCCATCTCCCTACTGC
AGCAAGAACACTCGTCAGGCGCGATGCCACTTAGGAGTTCACCTGCACTCATCTCATGAG
AGAGAGACAAAAAGAATTCCGGGTTTTGTCAGTAGAGGCCAACGTAAAATTTCAGAGCAT
TACCTTTTAGCAATCTTGGGTCTTGCCTCTCCCAGTGCAACCAAACAGCCATCTGTGCCT
TGTGGCCTCACCTCTACACTGGAGGGCTCCAAGCTCCTGAATTCAGCTCACCTGAGCCAG
CAGGCTGGGTCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               97-1089, gnl|bosTau2|chr1 (38116075-38117064)
               

               
               97-1089, gnl|Hg17|chr3 (126171229-126170262)
               

               
               97-1089, gnl|Mm7|chr16 (33442132-33443018)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               97-1089, gnl|bosTau2|chr1 (38116075-38117064)
               

               
               97-1089, gnl|Hg17|chr3 (126171229-126170262)
               

               
               97-1089, gnl|Mm7|chr16 (33442132-33443018)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               cty (0.10408)

	97-1089, gnl\|bosTau2\|chr1 (38116075-38117064)
	97-1089, gnl\|Hg17\|chr3 (126171229-126170262)
	97-1089, gnl\|Mm7\|chr16 (33442132-33443018)