Non-Coding RNA Search

Ss1.1-Mixc-0032k21.3

Sequence:


               
               GCCTGTCACTGCTCCTCGTCATCCTGAGCCGTGGGGAGGACCTACAGAGTTCAGACCCCG
CTTCAGAATCCACGCAAAACAGCCAGTGGACGGAGGTGATGTTCATGGCAACCCGAGAAC
TTCTGCGGATTCCCCAGGCAGCCCTGGCCAAGACGATCTCTATACCCACAAACCTAGTAT
CCCTCTTTTCTCGTTATGTTGACCGACAGAAACTGAACTTGCTGGAGACAAAACTGCAGC
TAGTTCAGGGGATACGGTAAAGATCTCCACATGCGTCCTGTACCTCCTCTTGGCTGCCAC
CTGCACTGCTGCCATCGCCAATGGAGTGTTGTTTTTAATGAGGGAGGGAAGGTAGCTTAT
TCCCCAGAGCATCTTGTGGGACCCATTCCTGTTCACAGGGTTGTCTCTGAGTGCCAGGTA
TTGCCCCACTGCTCTGAGATCTGGCTGGGTGATACTTCTGCTGGTTTCTTTTTACCTTCT
GTGTTACAATTCTGCATGTCCTACTTTTCCTCAATTCTTCTCAATTTCGCATTTTCTTTG
CCCTAGAGACACAAATATAATCTCTCCCTTTGTCCTACCACCACTACTCCAGTTCAGAAT
AGATTGTAGTCTGCCAAAGGGTTCCTTCCCTCATCCTATCGCAGTCTGTTTTTATTGCCC
CATATTAACATGCCCATAGGAGAGCCAGTTGAGTAGAAATCAATATAGATATGCACACGC
ACCCTATATATACATTTATGTGGTCTCCAGAGGATCCTTAAAGAAGGAGTTTTAGATTGA
GAACTATTTAGTTGACACATCCCTTTTCTAACCACAAACCAGCTGATGTATTTTTAATCT
GTTTCTCGTCCATCTTGTAATGAATTTGGTGGGTTCTTCTTGTTTTAATATAAATATAGG
GTATGCAGCACGTTTAATAAAATCAGAATTCTTAATTTGGCCGATGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGTCACTGCTCCTCGTCATCCTGAGCCGTGGGGAGGACCTACAGAGTTCAGACCCCG
CTTCAGAATCCACGCAAAACAGCCAGTGGACGGAGGTGATGTTCATGGCAACCCGAGAAC
TTCTGCGGATTCCCCAGGCAGCCCTGGCCAAGACGATCTCTATACCCACAAACCTAGTAT
CCCTCTTTTCTCGTTATGTTGACCGACAGAAACTGAACTTGCTGGAGACAAAACTGCAGC
TAGTTCAGGGGATACGGTAAAGATCTCCACATGCGTCCTGTACCTCCTCTTGGCTGCCAC
CTGCACTGCTGCCATCGCCAATGGAGTGTTGTTTTTAATGAGGGAGGGAAGGTAGCTTAT
TCCCCAGAGCATCTTGTGGGACCCATTCCTGTTCACAGGGTTGTCTCTGAGTGCCAGGTA
TTGCCCCACTGCTCTGAGATCTGGCTGGGTGATACTTCTGCTGGTTTCTTTTTACCTTCT
GTGTTACAATTCTGCATGTCCTACTTTTCCTCAATTCTTCTCAATTTCGCATTTTCTTTG
CCCTAGAGACACAAATATAATCTCTCCCTTTGTCCTACCACCACTACTCCAGTTCAGAAT
AGATTGTAGTCTGCCAAAGGGTTCCTTCCCTCATCCTATCGCAGTCTGTTTTTATTGCCC
CATATTAACATGCCCATAGGAGAGCCAGTTGAGTAGAAATCAATATAGATATGCACACGC
ACCCTATATATACATTTATGTGGTCTCCAGAGGATCCTTAAAGAAGGAGTTTTAGATTGA
GAACTATTTAGTTGACACATCCCTTTTCTAACCACAAACCAGCTGATGTATTTTTAATCT
GTTTCTCGTCCATCTTGTAATGAATTTGGTGGGTTCTTCTTGTTTTAATATAAATATAGG
GTATGCAGCACGTTTAATAAAATCAGAATTCTTAATTTGGCCGATGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21104508|dbj|BAB93524.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21104508|dbj|BAB93524.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               239-948, gnl|bosTau2|chr15 (52884396-52883706)
               

               
               239-948, gnl|Hg17|chr11 (59162460-59161739)
               

               
               239-948, gnl|Mm7|chr19 (11623454-11624151)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               239-948, gnl|bosTau2|chr15 (52884396-52883706)
               

               
               239-948, gnl|Hg17|chr11 (59162460-59161739)
               

               
               239-948, gnl|Mm7|chr19 (11623454-11624151)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	239-948, gnl\|bosTau2\|chr15 (52884396-52883706)
	239-948, gnl\|Hg17\|chr11 (59162460-59161739)
	239-948, gnl\|Mm7\|chr19 (11623454-11624151)