Non-Coding RNA Search

Ss1.1-Mixc-0032o12.3

Sequence:


               
               GCCTGGGCCGCCTGCTGGCCCACAGCAAGCGCGCCGTCAAGAAGTTCGTCAACTGCGACG
TGATGCTGGAGCCCGGCGAGTATGCCGTGGTGTGCTGTGCCTTCAACCACTGGGGCCCCG
CGCCCGGCCCACCGGCGGCGCAGGCCTCCAGCCCCTCCACCGGGGTCCCCCGCGGCGCCC
CGGAGCCGCCTGGCCACGTGCTTGCCGTGTACAGCTCGAGGCTCGTCATGGTGGAGCCTG
TGGAGGCCCAGCCGACCACGCTGGCCGATGCCATCATCCTGCTCACGGAGAGCAGGGGCG
AGCGGCACGAGGGCCGCGAGGGCATGACCTGCTACTACCTGACGCACGGCTGGGCGGGGC
TCATCGTGGTGGTGGAGAACCGGCACCCTAAGTCTTACCTGCACGTGCAGTGCGACTGCT
CTGACAGCTTCAACGTGGTGTCCACCCGGGGCAGCCTGCGCACCCAGGACAGCGTGCCGC
CCCTGCACAGCCTCCACATGGAATACCTCCAAGTGGCCTCCAGCTCCAGGGGCTGTGTGC
CAGCGCCTCTGACCAGCCGTCCTGGAGGTCTGGCTCGGACTCCCAGAGCCCAGTTGTCAG
CACCATCCCTGTAGGATGTCTCCATGGGTGTTTCCAGACTCAGGCTGCGACGGACCAAAT
AAAAATGTTTTGTTTTGTAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGGGCCGCCTGCTGGCCCACAGCAAGCGCGCCGTCAAGAAGTTCGTCAACTGCGACG
TGATGCTGGAGCCCGGCGAGTATGCCGTGGTGTGCTGTGCCTTCAACCACTGGGGCCCCG
CGCCCGGCCCACCGGCGGCGCAGGCCTCCAGCCCCTCCACCGGGGTCCCCCGCGGCGCCC
CGGAGCCGCCTGGCCACGTGCTTGCCGTGTACAGCTCGAGGCTCGTCATGGTGGAGCCTG
TGGAGGCCCAGCCGACCACGCTGGCCGATGCCATCATCCTGCTCACGGAGAGCAGGGGCG
AGCGGCACGAGGGCCGCGAGGGCATGACCTGCTACTACCTGACGCACGGCTGGGCGGGGC
TCATCGTGGTGGTGGAGAACCGGCACCCTAAGTCTTACCTGCACGTGCAGTGCGACTGCT
CTGACAGCTTCAACGTGGTGTCCACCCGGGGCAGCCTGCGCACCCAGGACAGCGTGCCGC
CCCTGCACAGCCTCCACATGGAATACCTCCAAGTGGCCTCCAGCTCCAGGGGCTGTGTGC
CAGCGCCTCTGACCAGCCGTCCTGGAGGTCTGGCTCGGACTCCCAGAGCCCAGTTGTCAG
CACCATCCCTGTAGGATGTCTCCATGGGTGTTTCCAGACTCAGGCTGCGACGGACCAAAT
AAAAATGTTTTGTTTTGTAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12804847|gb|AAH01869.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12804847|gb|AAH01869.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               144-312, gnl|bosTau2|chr25 (1330393-1330225)
               

               
               144-312, gnl|Hg17|chr16 (542605-542773)
               

               
               144-312, gnl|Mm7|chr17 (24143472-24143304)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               144-312, gnl|bosTau2|chr25 (1330393-1330225)
               

               
               144-312, gnl|Hg17|chr16 (542605-542773)
               

               
               144-312, gnl|Mm7|chr17 (24143472-24143304)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               med (0.116252)

	144-312, gnl\|bosTau2\|chr25 (1330393-1330225)
	144-312, gnl\|Hg17\|chr16 (542605-542773)
	144-312, gnl\|Mm7\|chr17 (24143472-24143304)