Non-Coding RNA Search

Ss1.1-Mixc-0033a06.5

Sequence:


               
               GAAGTTGTCCTCACTCGCAAACAAAATTACATGATGAATTTTTCACGGCAACATGGGCTC
AGGCACTTCTACAACAGAAGACGGAGGTCACTTAGACGATACCCATGAAGAATCCAAAAC
TTTATTTTTTTTTCTCCCAACCTGTGACGTGGCGTTTTCCATTCCTTTAAATCTCGCCCT
GCATCTGATATCAGGAAATTCCTGCGAAGGACTTGGTGACTAACGGAAAGCCCTTCTCCA
GACCGAGTGTCCACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTTCGCAT
AAGTAAATGTCTTCATGTTGATGTGTCTGTGCACATTGTGATCTGTTGTAATATCAGTTA
CAGTGGCAGTATTGAAAATAAGAAATAGTCTAACAGATTAAAAAAAAATTTAAGCACAAA
AGTTTAAGAGACTTTATGTTTAAAAATGGCGTTTAGTACAGTCTGTAACATTCTTGGTCA
CAAAGCTATTGAAGTGGACTGTATTTCAACTACGTATCCTGTTTTATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTTGTCCTCACTCGCAAACAAAATTACATGATGAATTTTTCACGGCAACATGGGCTC
AGGCACTTCTACAACAGAAGACGGAGGTCACTTAGACGATACCCATGAAGAATCCAAAAC
TTTATTTTTTTTTCTCCCAACCTGTGACGTGGCGTTTTCCATTCCTTTAAATCTCGCCCT
GCATCTGATATCAGGAAATTCCTGCGAAGGACTTGGTGACTAACGGAAAGCCCTTCTCCA
GACCGAGTGTCCACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTTCGCAT
AAGTAAATGTCTTCATGTTGATGTGTCTGTGCACATTGTGATCTGTTGTAATATCAGTTA
CAGTGGCAGTATTGAAAATAAGAAATAGTCTAACAGATTAAAAAAAAATTTAAGCACAAA
AGTTTAAGAGACTTTATGTTTAAAAATGGCGTTTAGTACAGTCTGTAACATTCTTGGTCA
CAAAGCTATTGAAGTGGACTGTATTTCAACTACGTATCCTGTTTTATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               12-528, gnl|bosTau2|chr4 (21786994-21787503)
               

               
               12-528, gnl|Hg17|chr7 (102707306-102706793)
               

               
               12-528, gnl|Mm7|chr5 (20923531-20923026)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-528, gnl|bosTau2|chr4 (21786994-21787503)
               

               
               12-528, gnl|Hg17|chr7 (102707306-102706793)
               

               
               12-528, gnl|Mm7|chr5 (20923531-20923026)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eli (0.151814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)

	12-528, gnl\|bosTau2\|chr4 (21786994-21787503)
	12-528, gnl\|Hg17\|chr7 (102707306-102706793)
	12-528, gnl\|Mm7\|chr5 (20923531-20923026)