Ss1.1-Mixc-0033b19.3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTTCTGCAGCAGGTGGCACAAATTTATCAGAGCATTGAGTTTTCTCGTTTGACTTCTCT GGTTCCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATAGTAGATGCTGCCAGGCACTG TGACCTTCAGGTTCGTATTGACCACACTTCTCGGACCCTTAGCTTTGGATCTGATTTGAA TTATGCGACTCGAGAAGATGCTCCAATTGGTCCTCATCTGCAAAGCATGCCTTCAGAACA GATAAGAAACCAGCTGACAGCCATGTCGTCAGTACTTGCAAAAGCACTTGAAGTCATCAA GCCAGCTCATATACTGCAAGAGAAAGAAGAACAGCATCAGTTGGCTGTTACTGCATACCT TAAAAATTCACGGAAAGAGCACCAGCGTATCCTGGCTCGCCGGCAGACAATAGAGGAAAG GAAAGAGCGGCTTGAGAGCCTGAATATTCAGCGTGAGAAAGAAGAACTGGAGCAGAGGGA AGCTGAACTCCAGAAAGTGCGGAAGGCTGAAGAAGAGAGGCTGCGACAGGAGGCAAAGGA GAGAGAGAAGGAGCGTATCTTACAGGAACATGAGCAAATCAAAAAGAAAACTGTTCGCGA GCGTTTGGAGCAGATCAAGAAGACAGAACTGGGTGCCAAAGCATTCAAAGATATTGATAT TGAAGACCTTGAAGAACTGGATCCAGATTTCATCATGGCTAAACAGGTTGAACAATTGGA GAAAGAAAAAAAGGAACTTCAGGAACGCCTAAAGAATCAAGAAAAAAAGATTGACTATTT TGAAAGAGCCAAACGTTTGGAAGAAATCCCTTTGATAAAGAGTGCTTATGAGGAACAGAG AATTAAAGACATGGATCTGTGGGAACAACAAGAAGAAGAAAGAATTACTACGATGCAGCT GGAACGGGAAAAGGCTCTTGAACATAAGAACCGAATGTCACGAATGCTTGAAGACAGAGA TTTATTTGTAATGCGACTCAAGGCAGCACGGCAGTCTGTTTATGAGGAAAAACTTAAACA GTTTGAAGAGCGATTAGCAGAAGAAAGGCATAATCGCTTGGAAGAACGTAAAAGGCAACG TAAAGAAGAACGAAGAATAACCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTTCTGCAGCAGGTGGCACAAATTTATCAGAGCATTGAGTTTTCTCGTTTGACTTCTCT GGTTCCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATAGTAGATGCTGCCAGGCACTG TGACCTTCAGGTTCGTATTGACCACACTTCTCGGACCCTTAGCTTTGGATCTGATTTGAA TTATGCGACTCGAGAAGATGCTCCAATTGGTCCTCATCTGCAAAGCATGCCTTCAGAACA GATAAGAAACCAGCTGACAGCCATGTCGTCAGTACTTGCAAAAGCACTTGAAGTCATCAA GCCAGCTCATATACTGCAAGAGAAAGAAGAACAGCATCAGTTGGCTGTTACTGCATACCT TAAAAATTCACGGAAAGAGCACCAGCGTATCCTGGCTCGCCGGCAGACAATAGAGGAAAG GAAAGAGCGGCTTGAGAGCCTGAATATTCAGCGTGAGAAAGAAGAACTGGAGCAGAGGGA AGCTGAACTCCAGAAAGTGCGGAAGGCTGAAGAAGAGAGGCTGCGACAGGAGGCAAAGGA GAGAGAGAAGGAGCGTATCTTACAGGAACATGAGCAAATCAAAAAGAAAACTGTTCGCGA GCGTTTGGAGCAGATCAAGAAGACAGAACTGGGTGCCAAAGCATTCAAAGATATTGATAT TGAAGACCTTGAAGAACTGGATCCAGATTTCATCATGGCTAAACAGGTTGAACAATTGGA GAAAGAAAAAAAGGAACTTCAGGAACGCCTAAAGAATCAAGAAAAAAAGATTGACTATTT TGAAAGAGCCAAACGTTTGGAAGAAATCCCTTTGATAAAGAGTGCTTATGAGGAACAGAG AATTAAAGACATGGATCTGTGGGAACAACAAGAAGAAGAAAGAATTACTACGATGCAGCT GGAACGGGAAAAGGCTCTTGAACATAAGAACCGAATGTCACGAATGCTTGAAGACAGAGA TTTATTTGTAATGCGACTCAAGGCAGCACGGCAGTCTGTTTATGAGGAAAAACTTAAACA GTTTGAAGAGCGATTAGCAGAAGAAAGGCATAATCGCTTGGAAGAACGTAAAAGGCAACG TAAAGAAGAACGAAGAATAACCTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 3-132, gnl|bosTau2|chr26 (26113006-26113135) | |
| 3-132, gnl|canFam2|chr28 (32309142-32309320) | |
| 3-132, gnl|danRer3|chr13 (9712209-9712068) | |
| 3-132, gnl|dasNov1|scaffold_8330 (24995-25172) | |
| 3-132, gnl|echTel1|scaffold_306346 (42617-42793) | |
| 3-132, gnl|fr1|chrUn (184908045-184908200) | |
| 3-132, gnl|galGal2|chr6 (29016782-29016936) | |
| 3-132, gnl|hg17|chr10 (120809068-120809247) | |
| 3-132, gnl|Hg17|chr10 (120809231-120809102) | |
| 3-132, gnl|loxAfr1|scaffold_502 (136306-136124) | |
| 3-132, gnl|mm7|chr19 (60696570-60696753) | |
| 3-132, gnl|Mm7|chr19 (60696737-60696607) | |
| 3-132, gnl|monDom2|scaffold_14 (41334503-41334308) | |
| 3-132, gnl|oryCun1|scaffold_205208 (8319-8167) | |
| 3-132, gnl|panTro1|chr8 (123077009-123077188) | |
| 3-132, gnl|rheMac2|chr9 (118674979-118675158) | |
| 3-132, gnl|rn3|chr1 (267594551-267594738) | |
| 3-132, gnl|tetNig1|chrUn_random (95867187-95867337) | |
| 3-132, gnl|xenTro1|scaffold_337 (1119511-1119330) | |
| 316-665, gnl|bosTau2|chr26 (26114176-26114525) | |
| 316-665, gnl|canFam2|chr28 (32307574-32307825) | |
| 316-665, gnl|danRer3|chr13 (9712989-9712738) | |
| 316-665, gnl|dasNov1|scaffold_8330 (23637-23890) | |
| 316-665, gnl|echTel1|scaffold_306346 (40919-41170) | |
| 316-665, gnl|fr1|chrUn (184907317-184907564) | |
| 316-665, gnl|galGal2|chr6 (29013011-29013258) | |
| 316-665, gnl|hg17|chr10 (120807445-120807696) | |
| 316-665, gnl|Hg17|chr10 (120807806-120807457) | |
| 316-665, gnl|loxAfr1|scaffold_502 (137876-137622) | |
| 316-665, gnl|mm7|chr19 (60695387-60695638) | |
| 316-665, gnl|Mm7|chr19 (60695748-60695399) | |
| 316-665, gnl|monDom2|scaffold_14 (41337579-41337331) | |
| 316-665, gnl|oryCun1|scaffold_205208 (9962-9711) | |
| 316-665, gnl|panTro1|chr8 (123075386-123075637) | |
| 316-665, gnl|rheMac2|chr9 (118673097-118673348) | |
| 316-665, gnl|rn3|chr1 (267593392-267593643) | |
| 316-665, gnl|xenTro1|scaffold_365 (342470-342226) | |
| 757-883, gnl|bosTau2|chr26 (26115137-26115263) | |
| 757-883, gnl|canFam2|chr28 (32306903-32307034) | |
| 757-883, gnl|danRer3|chr13 (9713478-9713366) | |
| 757-883, gnl|dasNov1|scaffold_8330 (22682-22812) | |
| 757-883, gnl|echTel1|scaffold_306346 (34917-35041) | |
| 757-883, gnl|fr1|chrUn (184906799-184906896) | |
| 757-883, gnl|galGal2|chr6 (29010688-29010801) | |
| 757-883, gnl|hg17|chr10 (120806204-120806334) | |
| 757-883, gnl|Hg17|chr10 (120806368-120806242) | |
| 757-883, gnl|loxAfr1|scaffold_502 (139661-139531) | |
| 757-883, gnl|mm7|chr19 (60694315-60694444) | |
| 757-883, gnl|Mm7|chr19 (60694478-60694352) | |
| 757-883, gnl|monDom2|scaffold_14 (41338170-41338034) | |
| 757-883, gnl|oryCun1|scaffold_205208 (10409-10280) | |
| 757-883, gnl|panTro1|chr8 (123074145-123074275) | |
| 757-883, gnl|rheMac2|chr9 (118671374-118671504) | |
| 757-883, gnl|rn3|chr1 (267592083-267592212) | |
| 757-883, gnl|tetNig1|chrUn_random (95866036-95866134) | |
| 757-883, gnl|xenTro1|scaffold_337 (1122613-1122504) | |
| 884-1007, gnl|bosTau2|chr26 (26116602-26116725) | |
| 884-1007, gnl|Hg17|chr10 (120800823-120800700) | |
| 884-1007, gnl|Mm7|chr19 (60693845-60693722) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-132, gnl|bosTau2|chr26 (26113006-26113135) | |
| 3-132, gnl|canFam2|chr28 (32309142-32309320) | |
| 3-132, gnl|danRer3|chr13 (9712209-9712068) | |
| 3-132, gnl|dasNov1|scaffold_8330 (24995-25172) | |
| 3-132, gnl|echTel1|scaffold_306346 (42617-42793) | |
| 3-132, gnl|fr1|chrUn (184908045-184908200) | |
| 3-132, gnl|galGal2|chr6 (29016782-29016936) | |
| 3-132, gnl|hg17|chr10 (120809068-120809247) | |
| 3-132, gnl|Hg17|chr10 (120809231-120809102) | |
| 3-132, gnl|loxAfr1|scaffold_502 (136306-136124) | |
| 3-132, gnl|mm7|chr19 (60696570-60696753) | |
| 3-132, gnl|Mm7|chr19 (60696737-60696607) | |
| 3-132, gnl|monDom2|scaffold_14 (41334503-41334308) | |
| 3-132, gnl|oryCun1|scaffold_205208 (8319-8167) | |
| 3-132, gnl|panTro1|chr8 (123077009-123077188) | |
| 3-132, gnl|rheMac2|chr9 (118674979-118675158) | |
| 3-132, gnl|rn3|chr1 (267594551-267594738) | |
| 3-132, gnl|tetNig1|chrUn_random (95867187-95867337) | |
| 3-132, gnl|xenTro1|scaffold_337 (1119511-1119330) | |
| 316-665, gnl|bosTau2|chr26 (26114176-26114525) | |
| 316-665, gnl|canFam2|chr28 (32307574-32307825) | |
| 316-665, gnl|danRer3|chr13 (9712989-9712738) | |
| 316-665, gnl|dasNov1|scaffold_8330 (23637-23890) | |
| 316-665, gnl|echTel1|scaffold_306346 (40919-41170) | |
| 316-665, gnl|fr1|chrUn (184907317-184907564) | |
| 316-665, gnl|galGal2|chr6 (29013011-29013258) | |
| 316-665, gnl|hg17|chr10 (120807445-120807696) | |
| 316-665, gnl|Hg17|chr10 (120807806-120807457) | |
| 316-665, gnl|loxAfr1|scaffold_502 (137876-137622) | |
| 316-665, gnl|mm7|chr19 (60695387-60695638) | |
| 316-665, gnl|Mm7|chr19 (60695748-60695399) | |
| 316-665, gnl|monDom2|scaffold_14 (41337579-41337331) | |
| 316-665, gnl|oryCun1|scaffold_205208 (9962-9711) | |
| 316-665, gnl|panTro1|chr8 (123075386-123075637) | |
| 316-665, gnl|rheMac2|chr9 (118673097-118673348) | |
| 316-665, gnl|rn3|chr1 (267593392-267593643) | |
| 316-665, gnl|xenTro1|scaffold_365 (342470-342226) | |
| 757-883, gnl|bosTau2|chr26 (26115137-26115263) | |
| 757-883, gnl|canFam2|chr28 (32306903-32307034) | |
| 757-883, gnl|danRer3|chr13 (9713478-9713366) | |
| 757-883, gnl|dasNov1|scaffold_8330 (22682-22812) | |
| 757-883, gnl|echTel1|scaffold_306346 (34917-35041) | |
| 757-883, gnl|fr1|chrUn (184906799-184906896) | |
| 757-883, gnl|galGal2|chr6 (29010688-29010801) | |
| 757-883, gnl|hg17|chr10 (120806204-120806334) | |
| 757-883, gnl|Hg17|chr10 (120806368-120806242) | |
| 757-883, gnl|loxAfr1|scaffold_502 (139661-139531) | |
| 757-883, gnl|mm7|chr19 (60694315-60694444) | |
| 757-883, gnl|Mm7|chr19 (60694478-60694352) | |
| 757-883, gnl|monDom2|scaffold_14 (41338170-41338034) | |
| 757-883, gnl|oryCun1|scaffold_205208 (10409-10280) | |
| 757-883, gnl|panTro1|chr8 (123074145-123074275) | |
| 757-883, gnl|rheMac2|chr9 (118671374-118671504) | |
| 757-883, gnl|rn3|chr1 (267592083-267592212) | |
| 757-883, gnl|tetNig1|chrUn_random (95866036-95866134) | |
| 757-883, gnl|xenTro1|scaffold_337 (1122613-1122504) | |
| 884-1007, gnl|bosTau2|chr26 (26116602-26116725) | |
| 884-1007, gnl|Hg17|chr10 (120800823-120800700) | |
| 884-1007, gnl|Mm7|chr19 (60693845-60693722) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| mgm (0.360685) | |
| bla (0.248694) | |
| sin (0.174948) | |
| cki (0.165235) | |
| ova (0.129132) | |
| thg (0.126791) | |
| nbm (0.0993246) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mgm (0.360685) | |
| bla (0.248694) | |
| sin (0.174948) | |
| cki (0.165235) | |
| ova (0.129132) | |
| thg (0.126791) | |
| nbm (0.0993246) |