Non-Coding RNA Search

Ss1.1-Mixc-0033c01.3

Sequence:


               
               CCGGTCGTCGTCGTCCGCGGCGGCGGCCGCAGCGTGGGGCCGGGCGATTGTGACCGCCGG
GGGAGCAGGGGGCCGGCTGCGGCTCCCACTCTCCGTGTGGCCCCCTGAGCGCCCCCCCTC
CCCTGCTCGGGAGGGAGGCGGGGGGCACCCGGGGCCCGCCATGAACCCCGGTTTCGATCT
GTCCCGCCGGAACCCGCAGGAAGACTTCGAGCTGATTCAGCGCATCGGCAGCGGCACCTA
CGGCGACGTCTACAAGGCACGGAATGTTAACACCGGTGAATTGGCAGCAATTAAAGTAAT
AAAATTGGAGCCAGGAGAAGACTTTGCAGTTGTGCAGCAAGAAATTATTATGATGAAAGA
CTGTAAACACCCAAATATTGTTGCTTATTTTGGAAGCTATCTCAGGCGAGATAAACTTTG
GATTTGCATGGAGTTTTGTGGAGGTGGTTCTTTACAGGATATTTATCATGTAACGGGACC
TCTATCAGAACTACAAATTGCATATGTTAGCAGAGAAACACTGCAGGGATTATACTATCT
TCACAGTAAAGGAAAAATGCACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGTCGTCGTCGTCCGCGGCGGCGGCCGCAGCGTGGGGCCGGGCGATTGTGACCGCCGG
GGGAGCAGGGGGCCGGCTGCGGCTCCCACTCTCCGTGTGGCCCCCTGAGCGCCCCCCCTC
CCCTGCTCGGGAGGGAGGCGGGGGGCACCCGGGGCCCGCCATGAACCCCGGTTTCGATCT
GTCCCGCCGGAACCCGCAGGAAGACTTCGAGCTGATTCAGCGCATCGGCAGCGGCACCTA
CGGCGACGTCTACAAGGCACGGAATGTTAACACCGGTGAATTGGCAGCAATTAAAGTAAT
AAAATTGGAGCCAGGAGAAGACTTTGCAGTTGTGCAGCAAGAAATTATTATGATGAAAGA
CTGTAAACACCCAAATATTGTTGCTTATTTTGGAAGCTATCTCAGGCGAGATAAACTTTG
GATTTGCATGGAGTTTTGTGGAGGTGGTTCTTTACAGGATATTTATCATGTAACGGGACC
TCTATCAGAACTACAAATTGCATATGTTAGCAGAGAAACACTGCAGGGATTATACTATCT
TCACAGTAAAGGAAAAATGCACAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26337013|dbj|BAC32190.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26337013|dbj|BAC32190.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-257, gnl|bosTau2|chr11 (16703502-16703245)
               

               
               1-257, gnl|Hg17|chr2 (39575965-39575683)
               

               
               1-257, gnl|Mm7|chr17 (79023969-79023718)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-257, gnl|bosTau2|chr11 (16703502-16703245)
               

               
               1-257, gnl|Hg17|chr2 (39575965-39575683)
               

               
               1-257, gnl|Mm7|chr17 (79023969-79023718)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	1-257, gnl\|bosTau2\|chr11 (16703502-16703245)
	1-257, gnl\|Hg17\|chr2 (39575965-39575683)
	1-257, gnl\|Mm7\|chr17 (79023969-79023718)