Non-Coding RNA Search

Ss1.1-Mixc-0033e20.5

Sequence:


               
               GGAGACGCCAGGGCGTCCAGGTCCTGGTGTCCACCAGCAACGCCAGCTCGCTGGACGGCG
CTCGGAGCCTCATCACTGAGGCCACACAGCTTGGGCCCGTGGGAGGCGTCTTCAACCTGG
CCATGGTCCTGAGAGACGCCGTGCTGGAGAACCAGACCCCGGAGTTCTTCCAGGACGTCA
GTAAGCCCAAGTACAGCGGCACCGCGAACCTGGACAGGGTGACCCGGGAGGCGTGTCCCG
AGCTGGACTACTTCGTGATCTTCTCCTCCGTGAGCTGCGGGCGCGGCAATGCCGGCCAGG
CCAACTACGGCTTCGCCAACTCTGCCATGGAGCGCATCTGCGAGAAGCGCCGGCACGACG
GGCTCCCAGGCCTCGCCGTGCAGTGGGGTGCGATCGGCGACGTGGGCGTCGTCCTGGAGA
CCATGGGCACCAACGACACGGTCATCGGCGGGACGCTGCCCCAGCGCATCGCCTCCTGCC
TGGAGGTGCTGGATCTCTTCCTGAGCCAGCCCCACCCGTCCTGAGCAGCTTCGTCCTGGC
TGAGAAGAAGCCGCCCGCCCCCCAGGACGCAGCAGCCAGAAGGACCTGGTCAAGGCCGTG
GCTCACATCCTGGGCATCCGGGACGTGGCCTCCATCAATCCGGACAGCACGCTGGTGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGACGCCAGGGCGTCCAGGTCCTGGTGTCCACCAGCAACGCCAGCTCGCTGGACGGCG
CTCGGAGCCTCATCACTGAGGCCACACAGCTTGGGCCCGTGGGAGGCGTCTTCAACCTGG
CCATGGTCCTGAGAGACGCCGTGCTGGAGAACCAGACCCCGGAGTTCTTCCAGGACGTCA
GTAAGCCCAAGTACAGCGGCACCGCGAACCTGGACAGGGTGACCCGGGAGGCGTGTCCCG
AGCTGGACTACTTCGTGATCTTCTCCTCCGTGAGCTGCGGGCGCGGCAATGCCGGCCAGG
CCAACTACGGCTTCGCCAACTCTGCCATGGAGCGCATCTGCGAGAAGCGCCGGCACGACG
GGCTCCCAGGCCTCGCCGTGCAGTGGGGTGCGATCGGCGACGTGGGCGTCGTCCTGGAGA
CCATGGGCACCAACGACACGGTCATCGGCGGGACGCTGCCCCAGCGCATCGCCTCCTGCC
TGGAGGTGCTGGATCTCTTCCTGAGCCAGCCCCACCCGTCCTGAGCAGCTTCGTCCTGGC
TGAGAAGAAGCCGCCCGCCCCCCAGGACGCAGCAGCCAGAAGGACCTGGTCAAGGCCGTG
GCTCACATCCTGGGCATCCGGGACGTGGCCTCCATCAATCCGGACAGCACGCTGGTGGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               O89060_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               O89060_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               214-370, gnl|bosTau2|chr19 (44284014-44283858)
               

               
               214-370, gnl|Hg17|chr17 (77633329-77633173)
               

               
               214-370, gnl|Mm7|chr11 (120919330-120919174)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               214-370, gnl|bosTau2|chr19 (44284014-44283858)
               

               
               214-370, gnl|Hg17|chr17 (77633329-77633173)
               

               
               214-370, gnl|Mm7|chr11 (120919330-120919174)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               clu (0.119646)

	214-370, gnl\|bosTau2\|chr19 (44284014-44283858)
	214-370, gnl\|Hg17\|chr17 (77633329-77633173)
	214-370, gnl\|Mm7\|chr11 (120919330-120919174)