Non-Coding RNA Search

Ss1.1-Mixc-0033f15.3

Sequence:


               
               TTTTTATTATTTTTAAGAGATGTAGCAGAATAATCCTTCCAGTTGCAACAAAATCAATTT
TTGCTAAACGACTCCGAGAGCAACGGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGGA
ACTTTGCACTATTGGGGTATGATGGTTGGGTCAGTTGAAAAAAAAGGAAACCTTTTCATG
CCTTTAGATGTGAGCTTACAGTAGGTAATGATTATGTGTCCTTTTTTGATGGCTGTAATG
AGAACTTCAATCACTGTAGTCTAAGACCTGATCTATAGATGACCTAGAATAGCCATGTAA
TATAATGTGATGATTCTAAATTTGTACCTATGTGACAGACATTTTCAATAATGTGAACTG
CTGATTTGATGGAGCTACTTTAAGATTTGTAGGTGAAAGTGTAATACTATTGGTTGAACT
ATGCTGAAGAGGGAAAGTGAGCGATTAGTTGAGCCCTTGCCGGGCTTTTTTTTCCACCTG
CCAATTCTACATGTATTGTTGTGGTTTTATTCATTGTATGAAAATTCCTGTGATTTTTTT
TTTAAATGTGCAGTACACATCAGCCTCACTGAGCTAATAAAGGGAAACGAATGTTTCAAA
TCTAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTATTATTTTTAAGAGATGTAGCAGAATAATCCTTCCAGTTGCAACAAAATCAATTT
TTGCTAAACGACTCCGAGAGCAACGGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGGA
ACTTTGCACTATTGGGGTATGATGGTTGGGTCAGTTGAAAAAAAAGGAAACCTTTTCATG
CCTTTAGATGTGAGCTTACAGTAGGTAATGATTATGTGTCCTTTTTTGATGGCTGTAATG
AGAACTTCAATCACTGTAGTCTAAGACCTGATCTATAGATGACCTAGAATAGCCATGTAA
TATAATGTGATGATTCTAAATTTGTACCTATGTGACAGACATTTTCAATAATGTGAACTG
CTGATTTGATGGAGCTACTTTAAGATTTGTAGGTGAAAGTGTAATACTATTGGTTGAACT
ATGCTGAAGAGGGAAAGTGAGCGATTAGTTGAGCCCTTGCCGGGCTTTTTTTTCCACCTG
CCAATTCTACATGTATTGTTGTGGTTTTATTCATTGTATGAAAATTCCTGTGATTTTTTT
TTTAAATGTGCAGTACACATCAGCCTCACTGAGCTAATAAAGGGAAACGAATGTTTCAAA
TCTAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-604, gnl|bosTau2|chr6 (20936754-20936155)
               

               
               3-604, gnl|Hg17|chr4 (23470509-23469913)
               

               
               3-604, gnl|Mm7|chr5 (50827998-50827399)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-604, gnl|bosTau2|chr6 (20936754-20936155)
               

               
               3-604, gnl|Hg17|chr4 (23470509-23469913)
               

               
               3-604, gnl|Mm7|chr5 (50827998-50827399)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pro (0.512033)
               

               
               sag (0.182715)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               sag (0.182715)

	3-604, gnl\|bosTau2\|chr6 (20936754-20936155)
	3-604, gnl\|Hg17\|chr4 (23470509-23469913)
	3-604, gnl\|Mm7\|chr5 (50827998-50827399)