Non-Coding RNA Search

Ss1.1-Mixc-0033h21.3

Sequence:


               
               CTCTTTTAATAGACAAGAAGTTTACTTCACTGAGCCCACAGGGGGACGTGTTGTGAGTGT
TAAAGTTCAGTTTGTGTTAGAACCTTGCTTGATGTGGAGATTTTGTTTCTTAGTAGCGGA
GTTGAAAATCTTGTTTCCTCAGGTAACAGTTCAGGACGTAGCCTGTGTTCCTTCTCCCTA
AAGGAGCCCTTGCAGTGACTGCACAGTCAAGCTCTGGGCCACGATTCACACCGGTGCCGT
GCCAATCCTATGTTGAGGTGCAGGAAACAAATGTTGCGTCCTGGACTCTGGAAAGTGTGG
TGGGGAGTCTGCTGCTCGTGGGCTGTGATGCTTAAGTGCCTGAAATTCCCCTCAGTGACA
CATCATGATGCAGTTGGCAGAACAGCCCCCATAACATTGTTTCTCAAAATCTGAAGACAA
AGCCAGACTGGGGTTGGAATATGCACATAAATCACACTTTTCTTATCTACAGAAATTAAT
GTAAAAATGAAGTCTTCTTCTGTTGTATCTGACTAAATGAAAATAACTGTTTGTGGGTTT
TAATATAAATATTTATTGGTGTGCTTTGGAGGAAAGATATTTTTTCTTGATAGAATTTAC
CAAAGTGACTTGGTTTTGTTCACTGGCTAATGAGAGAACGGGTATGTCCAAGTTCTGTTA
AACACACAGCTTCTCTGTGTGAAGAGGAAAGTGCCTGTGTTCTTTGACTGCCGATTTGTC
GTTTTTTAGTAAGAAAATGATTGGCTTCAAAGAAGGTCGAGTTCATCCTTAATGCTGAGG
TTTTTTTAAAAAAATAAAAACTTGGTTTATACTTTCTATTAGTTTGCATGATTAATGGCA
TCTGCTTACGGTGACTTAATCGCTCAGAGCTGACAGCACCTGTCTCTACACTGAACCTCC
TTGAAGATGCAAACCACACTGTAGACTTTTTCATAAATAAATAACCAACTTCAACGTCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTTTTAATAGACAAGAAGTTTACTTCACTGAGCCCACAGGGGGACGTGTTGTGAGTGT
TAAAGTTCAGTTTGTGTTAGAACCTTGCTTGATGTGGAGATTTTGTTTCTTAGTAGCGGA
GTTGAAAATCTTGTTTCCTCAGGTAACAGTTCAGGACGTAGCCTGTGTTCCTTCTCCCTA
AAGGAGCCCTTGCAGTGACTGCACAGTCAAGCTCTGGGCCACGATTCACACCGGTGCCGT
GCCAATCCTATGTTGAGGTGCAGGAAACAAATGTTGCGTCCTGGACTCTGGAAAGTGTGG
TGGGGAGTCTGCTGCTCGTGGGCTGTGATGCTTAAGTGCCTGAAATTCCCCTCAGTGACA
CATCATGATGCAGTTGGCAGAACAGCCCCCATAACATTGTTTCTCAAAATCTGAAGACAA
AGCCAGACTGGGGTTGGAATATGCACATAAATCACACTTTTCTTATCTACAGAAATTAAT
GTAAAAATGAAGTCTTCTTCTGTTGTATCTGACTAAATGAAAATAACTGTTTGTGGGTTT
TAATATAAATATTTATTGGTGTGCTTTGGAGGAAAGATATTTTTTCTTGATAGAATTTAC
CAAAGTGACTTGGTTTTGTTCACTGGCTAATGAGAGAACGGGTATGTCCAAGTTCTGTTA
AACACACAGCTTCTCTGTGTGAAGAGGAAAGTGCCTGTGTTCTTTGACTGCCGATTTGTC
GTTTTTTAGTAAGAAAATGATTGGCTTCAAAGAAGGTCGAGTTCATCCTTAATGCTGAGG
TTTTTTTAAAAAAATAAAAACTTGGTTTATACTTTCTATTAGTTTGCATGATTAATGGCA
TCTGCTTACGGTGACTTAATCGCTCAGAGCTGACAGCACCTGTCTCTACACTGAACCTCC
TTGAAGATGCAAACCACACTGTAGACTTTTTCATAAATAAATAACCAACTTCAACGTCAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               302-959, gnl|bosTau2|chr1 (100107036-100107658)
               

               
               302-959, gnl|Hg17|chr8 (430476-429798)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               302-959, gnl|bosTau2|chr1 (100107036-100107658)
               

               
               302-959, gnl|Hg17|chr8 (430476-429798)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               mgp (0.230681)
               

               
               nlu (0.191681)
               

               
               rec (0.17307)
               

               
               fat (0.147427)
               

               
               kid (0.129735)
               

               
               sug (0.127291)
               

               
               thg (0.126791)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               nlu (0.191681)
               

               
               rec (0.17307)
               

               
               fat (0.147427)
               

               
               kid (0.129735)
               

               
               sug (0.127291)
               

               
               thg (0.126791)

	302-959, gnl\|bosTau2\|chr1 (100107036-100107658)
	302-959, gnl\|Hg17\|chr8 (430476-429798)

	mgp (0.230681)
	nlu (0.191681)
	rec (0.17307)
	fat (0.147427)
	kid (0.129735)
	sug (0.127291)
	thg (0.126791)