Non-Coding RNA Search

Ss1.1-Mixc-0034c18.3

Sequence:


               
               GGGGCAGGGGGAGTGCTTCTTGCGGAGCTCAAAGATTGCCAAACTCCATTTCACCTAAAA
CGTCACCCCTCTGGCCTCCTGGTGTGTCCATCTTTCCTTGGACGTAAATAGCATAGGGAA
GTCTCTTTTAAAAAAAACACTGTAACGATTACCCAAGCAAAATGAATGTTTTCTGAAAAC
ATTTCCCGCATATAGTGGGGCCCACTGAGTTCCCAACGCTGGTTGCAGATCCGCGTGCTG
GGCTGAATTCTGGCTGCATCACCAGGAGGGAGTGAGGGGCGGGGCTGAAGACTCCGGCGG
ATCTGAGGAGTCGATCCCCAGGAAGGAGCCAGGACACGCGCTGTGCTCACCTGAGGGATG
CTAGGCCATCTGGAATCCCTGAATGTCATTCCCTCTGTCCGCTTTCTGGAGGCCTGTTAA
TTACTTAGCCTCATTGATGTAAATGCTCTCTCAGGCAGCAACACCCTTAGAAGGCTGTTG
ATTCAGATGCTGAAGACCAACTGGCTAGAAACACCCACGAAAAGAGCCCTGCCTCGTTTC
CTCTGCAGGAGCCTGGACACACGCTCGGCCGATCCTCACCCAAAGTCACCTGACCTTCTG
CTTCTTGACTCTCCGCCTTCAGTCTTCCCAGAGAGCATCTCTCACTTTCCCCCCAAAGAA
AAAACCAAACCAGTCGCACCTTAAATATGGATATTTTTCCTCAGGGGCTTTAAATTGTTT
CCTATGCAACATGTCTTGTAGCACAAAATTCGATTCTACAAAAGTTGCAGTAAATTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGCAGGGGGAGTGCTTCTTGCGGAGCTCAAAGATTGCCAAACTCCATTTCACCTAAAA
CGTCACCCCTCTGGCCTCCTGGTGTGTCCATCTTTCCTTGGACGTAAATAGCATAGGGAA
GTCTCTTTTAAAAAAAACACTGTAACGATTACCCAAGCAAAATGAATGTTTTCTGAAAAC
ATTTCCCGCATATAGTGGGGCCCACTGAGTTCCCAACGCTGGTTGCAGATCCGCGTGCTG
GGCTGAATTCTGGCTGCATCACCAGGAGGGAGTGAGGGGCGGGGCTGAAGACTCCGGCGG
ATCTGAGGAGTCGATCCCCAGGAAGGAGCCAGGACACGCGCTGTGCTCACCTGAGGGATG
CTAGGCCATCTGGAATCCCTGAATGTCATTCCCTCTGTCCGCTTTCTGGAGGCCTGTTAA
TTACTTAGCCTCATTGATGTAAATGCTCTCTCAGGCAGCAACACCCTTAGAAGGCTGTTG
ATTCAGATGCTGAAGACCAACTGGCTAGAAACACCCACGAAAAGAGCCCTGCCTCGTTTC
CTCTGCAGGAGCCTGGACACACGCTCGGCCGATCCTCACCCAAAGTCACCTGACCTTCTG
CTTCTTGACTCTCCGCCTTCAGTCTTCCCAGAGAGCATCTCTCACTTTCCCCCCAAAGAA
AAAACCAAACCAGTCGCACCTTAAATATGGATATTTTTCCTCAGGGGCTTTAAATTGTTT
CCTATGCAACATGTCTTGTAGCACAAAATTCGATTCTACAAAAGTTGCAGTAAATTTTCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               36-780, gnl|bosTau2|chr3 (81118845-81118061)
               

               
               36-780, gnl|Hg17|chr2 (235745509-235746279)
               

               
               36-780, gnl|Mm7|chr1 (89059202-89059851)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-780, gnl|bosTau2|chr3 (81118845-81118061)
               

               
               36-780, gnl|Hg17|chr2 (235745509-235746279)
               

               
               36-780, gnl|Mm7|chr1 (89059202-89059851)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               pty (0.428143)
               

               
               cov (0.132153)
               

               
               cbr (0.127975)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.428143)
               

               
               cov (0.132153)
               

               
               cbr (0.127975)

	36-780, gnl\|bosTau2\|chr3 (81118845-81118061)
	36-780, gnl\|Hg17\|chr2 (235745509-235746279)
	36-780, gnl\|Mm7\|chr1 (89059202-89059851)