Non-Coding RNA Search

Ss1.1-Mixc-0034h04.3

Sequence:


               
               TTACTCAGGAATTTTGAAAAAGAAAACTTACGGGGTTGCCAGGATTTTATGGATCTAGAG
GAAGGAGTTGGGCTTACACCCAGCTAATCCAAGTAGGTTGCACTTCAGGTTAAATTCCTT
TGTGCAAATTCCTTGGCCTTTTTCTTAGCTTCATTAGACTGATCTTCTGGATGAAGGGAA
GTGGCATGGTATTGGTTTGAGTTGTTACTGTAATGTCTGTATTATCACTCACTCAGTGTG
GGCTATGCCTGAAAAGAGGGAATGGTTACTTATCATTGAGTCCTATTTTTAATCTTGCCA
AATGGAATTAGACGCTTGTAAAATGTAGATTGATGTCTTCTTAGATTATTACAAACTTTA
TGATAAGTAAGAGAATGTGGGTGTATATTTCACAGACTCTGATACTAACTGGTTGTGCCA
CTTTGGGCAAGTCAGCTGGCCACCCTGAACCCATTCTTATCTTCATTAAAATGCCGGGAG
GAGCACAAGTTGACATCTCACAACTTTATGGCCATGAAATCCCATGATTCCAACCATGTG
TGGTTTTAAAGGTCTTGCATTTCATTGCTGGTTCTCAATCTGATATTTTTCAAAATCCCA
TCAAGATATAGTGTATTATTTCAGCTAACAGAATTTTAAACAAAACCTTAAGTGACAAAA
TAATAGCTTTCTGTTTATGGGCATTATCCCACGTTCAGATGAGAACCTAATAATATGTCA
ATATCTGTGTGGGAATGAAAGAAGGCATGTATTTAACATTGTATATATACTGTTTATTAT
GTCTAGATGTAGATTTATGAATACGGGGGTTCATAGGAAGATAATAGGGCAGAGGAAATG
AGGGCAGATACGCATGACAGAATGAGTCTGTTAATTTCCCTATTTTTGCAGGATGTTTTG
ACAGCTTTTCTATTTAGTTTCCACCACCATTCACATGACTGAGAATGTGTCTGAGGTGGC
TGAGGATGATTTATGCTGCAAATGACTCTTTATCTGCCCATTGGAGAAATTACTGAAGCC
ATGGTAGGTGTGTAACATGGGTAGAAAACATCCTAATTTAGCCAGTTTGACCAAATTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACTCAGGAATTTTGAAAAAGAAAACTTACGGGGTTGCCAGGATTTTATGGATCTAGAG
GAAGGAGTTGGGCTTACACCCAGCTAATCCAAGTAGGTTGCACTTCAGGTTAAATTCCTT
TGTGCAAATTCCTTGGCCTTTTTCTTAGCTTCATTAGACTGATCTTCTGGATGAAGGGAA
GTGGCATGGTATTGGTTTGAGTTGTTACTGTAATGTCTGTATTATCACTCACTCAGTGTG
GGCTATGCCTGAAAAGAGGGAATGGTTACTTATCATTGAGTCCTATTTTTAATCTTGCCA
AATGGAATTAGACGCTTGTAAAATGTAGATTGATGTCTTCTTAGATTATTACAAACTTTA
TGATAAGTAAGAGAATGTGGGTGTATATTTCACAGACTCTGATACTAACTGGTTGTGCCA
CTTTGGGCAAGTCAGCTGGCCACCCTGAACCCATTCTTATCTTCATTAAAATGCCGGGAG
GAGCACAAGTTGACATCTCACAACTTTATGGCCATGAAATCCCATGATTCCAACCATGTG
TGGTTTTAAAGGTCTTGCATTTCATTGCTGGTTCTCAATCTGATATTTTTCAAAATCCCA
TCAAGATATAGTGTATTATTTCAGCTAACAGAATTTTAAACAAAACCTTAAGTGACAAAA
TAATAGCTTTCTGTTTATGGGCATTATCCCACGTTCAGATGAGAACCTAATAATATGTCA
ATATCTGTGTGGGAATGAAAGAAGGCATGTATTTAACATTGTATATATACTGTTTATTAT
GTCTAGATGTAGATTTATGAATACGGGGGTTCATAGGAAGATAATAGGGCAGAGGAAATG
AGGGCAGATACGCATGACAGAATGAGTCTGTTAATTTCCCTATTTTTGCAGGATGTTTTG
ACAGCTTTTCTATTTAGTTTCCACCACCATTCACATGACTGAGAATGTGTCTGAGGTGGC
TGAGGATGATTTATGCTGCAAATGACTCTTTATCTGCCCATTGGAGAAATTACTGAAGCC
ATGGTAGGTGTGTAACATGGGTAGAAAACATCCTAATTTAGCCAGTTTGACCAAATTTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-1079, gnl|bosTau2|chr26 (8154689-8153604)
               

               
               11-1079, gnl|Hg17|chr10 (98447148-98446096)
               

               
               11-1079, gnl|Mm7|chr19 (41261477-41260395)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-1079, gnl|bosTau2|chr26 (8154689-8153604)
               

               
               11-1079, gnl|Hg17|chr10 (98447148-98446096)
               

               
               11-1079, gnl|Mm7|chr19 (41261477-41260395)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	11-1079, gnl\|bosTau2\|chr26 (8154689-8153604)
	11-1079, gnl\|Hg17\|chr10 (98447148-98446096)
	11-1079, gnl\|Mm7\|chr19 (41261477-41260395)