Non-Coding RNA Search

Ss1.1-Mixc-0034h07.5

Sequence:


               
               GACTCACCCTAGGCCCTGCGTCCTTTGGGACAGCCTGCCTTGGTTAAAGCCACATTGACA
GCTGGCATTTGCTGACCTCCGGTTCATGTGAGTCACTTTCCTAAGTTATGTGTGATCCTT
ACAACAGCTGTATGAGGTAAGCACCATCAGCCCTCTGTTAATGAGGAGACTAAGGCAAAG
CCCAAGTTTGAACACCTGCTAGCCCCAAGTTGGGCCTGTGTTCCAGGTGCATGATGCATG
CCTCCTGGGTGTTAGGCTAGAGGACTGCTCACTACCTGCAGCTGGAAACATTGCCTTTTG
GAGCTCCATCCTTTTAAATATTCCCTGAGGGAAGCATTGGCTCCTGAGGAAGGTTTTGGG
GCAGAGAGAACAGGAGAGCGCTAGAGTGCCTGCAGGAGGAGGGTAGCAGGGGAATGATCC
ACAGGCAGAAGGCAGAATTTAAGGCTGGGATTTCATATGTTGATAGACCTGCACCCTTAG
TAGCCAGACGTACACCAAATCTAGTCTGTGTGTTGGGCTTGACACCATTTGGAAGTGGCA
CGTAGAAGTCCAGGGTGCAGATGTGAGGATGGCTGAGAGAGGAATCATTTCTTCAGTCTG
AGCTGATCACTGGCACAGGCAGACGATTTTAACTTCTTATTGAAGCCTGACAGGTACGCA
CAAGTTGGTGATTTTTCACAAACAAAATGCATATGTAGTTAGCACCCAGATCACACAACA
CTCCCAGCACCCCAAAAGCCCTTCCTGTTCTCTTCTAGTTACTGCCTCCCAAGGTTGGCC
ACTGATTGGATTTTTAAGTGCATAGGTTAGTTTTGTCTGTTTTTGGACATTATATGAACA
GAGTCAAACCATATGTATTATTTTGTATTGGCTGATTTGCTCAACATCATGTGAGATTTT
TGTTGCATGTACTTGCCTCATTTTCATGGCTGTATAGTATTCCAATGCATGAATAAACCA
CATATTATTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTCACCCTAGGCCCTGCGTCCTTTGGGACAGCCTGCCTTGGTTAAAGCCACATTGACA
GCTGGCATTTGCTGACCTCCGGTTCATGTGAGTCACTTTCCTAAGTTATGTGTGATCCTT
ACAACAGCTGTATGAGGTAAGCACCATCAGCCCTCTGTTAATGAGGAGACTAAGGCAAAG
CCCAAGTTTGAACACCTGCTAGCCCCAAGTTGGGCCTGTGTTCCAGGTGCATGATGCATG
CCTCCTGGGTGTTAGGCTAGAGGACTGCTCACTACCTGCAGCTGGAAACATTGCCTTTTG
GAGCTCCATCCTTTTAAATATTCCCTGAGGGAAGCATTGGCTCCTGAGGAAGGTTTTGGG
GCAGAGAGAACAGGAGAGCGCTAGAGTGCCTGCAGGAGGAGGGTAGCAGGGGAATGATCC
ACAGGCAGAAGGCAGAATTTAAGGCTGGGATTTCATATGTTGATAGACCTGCACCCTTAG
TAGCCAGACGTACACCAAATCTAGTCTGTGTGTTGGGCTTGACACCATTTGGAAGTGGCA
CGTAGAAGTCCAGGGTGCAGATGTGAGGATGGCTGAGAGAGGAATCATTTCTTCAGTCTG
AGCTGATCACTGGCACAGGCAGACGATTTTAACTTCTTATTGAAGCCTGACAGGTACGCA
CAAGTTGGTGATTTTTCACAAACAAAATGCATATGTAGTTAGCACCCAGATCACACAACA
CTCCCAGCACCCCAAAAGCCCTTCCTGTTCTCTTCTAGTTACTGCCTCCCAAGGTTGGCC
ACTGATTGGATTTTTAAGTGCATAGGTTAGTTTTGTCTGTTTTTGGACATTATATGAACA
GAGTCAAACCATATGTATTATTTTGTATTGGCTGATTTGCTCAACATCATGTGAGATTTT
TGTTGCATGTACTTGCCTCATTTTCATGGCTGTATAGTATTCCAATGCATGAATAAACCA
CATATTATTTAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               684-972, gnl|bosTau2|chr24 (30507403-30507692)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               684-972, gnl|bosTau2|chr24 (30507403-30507692)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               jej (0.197844)
               

               
               cki (0.165235)
               

               
               bfe (0.149858)
               

               
               csk (0.140746)
               

               
               ldo (0.0970026)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               cki (0.165235)
               

               
               bfe (0.149858)
               

               
               csk (0.140746)
               

               
               ldo (0.0970026)

	jej (0.197844)
	cki (0.165235)
	bfe (0.149858)
	csk (0.140746)
	ldo (0.0970026)