Non-Coding RNA Search

Ss1.1-Mixc-0034i22.5

Sequence:


               
               GAGCGGTGAGGGAGCCCTCCCCTGAGAATAGGGCACGGACTCAGACCTTTCTCTAAAACC
AGCTCTGCTCTGCCAGCGGGTGAGGACTCTGGGAAGGGGCTGCCATTGCTTTGTGAAGGA
TGGTAGCCGGCAGCTTCTGGTGGTGTTGGTCTTAGCCAGTTCCGGGACCTGGCAGAGGAG
TCAGAGAAGTGGATGGCAATCATCAGAGAGCGTCTGCTGCCCTTCACCTTCGTGGGAAAC
CTCTTCATGGTGCCTGATGACCCACTGGGGCGAAATGGCCCCACACTGGATGAGTTCCTG
AAAAAGCCGGTCAGGGCACAGGGATCTTCTAAGGCTCAGCATTCTGCCAGGGGCTTTGCA
GAACATGGCAATCAGCAGCAGGGGAAAAAAGAAGAAGAAAAAGGCAGTGGTGGCCTTCGG
AAGACACGGGAGACAGAGCGGCTCCGGCGCCAACTGCTGGAGGTATTTTGGGGCCAGGAT
CACAAGGTGGACTTCATCCTGCAGCGAGAGCCATACTGCCGGGACATCAACCAGCTCTCC
GAGGCCCTGCTCAGTCTCAATTTTTGAGCCTTACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCGGTGAGGGAGCCCTCCCCTGAGAATAGGGCACGGACTCAGACCTTTCTCTAAAACC
AGCTCTGCTCTGCCAGCGGGTGAGGACTCTGGGAAGGGGCTGCCATTGCTTTGTGAAGGA
TGGTAGCCGGCAGCTTCTGGTGGTGTTGGTCTTAGCCAGTTCCGGGACCTGGCAGAGGAG
TCAGAGAAGTGGATGGCAATCATCAGAGAGCGTCTGCTGCCCTTCACCTTCGTGGGAAAC
CTCTTCATGGTGCCTGATGACCCACTGGGGCGAAATGGCCCCACACTGGATGAGTTCCTG
AAAAAGCCGGTCAGGGCACAGGGATCTTCTAAGGCTCAGCATTCTGCCAGGGGCTTTGCA
GAACATGGCAATCAGCAGCAGGGGAAAAAAGAAGAAGAAAAAGGCAGTGGTGGCCTTCGG
AAGACACGGGAGACAGAGCGGCTCCGGCGCCAACTGCTGGAGGTATTTTGGGGCCAGGAT
CACAAGGTGGACTTCATCCTGCAGCGAGAGCCATACTGCCGGGACATCAACCAGCTCTCC
GAGGCCCTGCTCAGTCTCAATTTTTGAGCCTTACCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9GMX3_MACFA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9GMX3_MACFA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               312-576, gnl|bosTau2|chr10 (11899548-11899812)
               

               
               312-576, gnl|Hg17|chr14 (23976079-23976340)
               

               
               312-576, gnl|Mm7|chr14 (50762213-50762474)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               312-576, gnl|bosTau2|chr10 (11899548-11899812)
               

               
               312-576, gnl|Hg17|chr14 (23976079-23976340)
               

               
               312-576, gnl|Mm7|chr14 (50762213-50762474)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eli (0.151814)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)
               

               
               eru (0.120048)

	312-576, gnl\|bosTau2\|chr10 (11899548-11899812)
	312-576, gnl\|Hg17\|chr14 (23976079-23976340)
	312-576, gnl\|Mm7\|chr14 (50762213-50762474)