Non-Coding RNA Search

Ss1.1-Mixc-0034k23.3

Sequence:


               
               AAAAAAACCCACATTTATAATACGGGAAAAGATCATCTATAAAGGTGTGGTAGTACTATT
GCTGTCAAGGTGTATACTGATATATGTGGATCAGTCCTCCCAGGGCAGAGATGTTTGTTT
TATTCACTGAGGTACCCTAAGCACCTAAAACAGTGCCAGGTGTAGGGCAGATGCTCAGTA
CATATTTGTAGAATAAATAGTGGGAAGATCTCTGGGACTGGGAGTTGGGCAATCTGGATC
CTAGATATGCCAATTGGCAGAGTACTTGTAGGCCAATCAGAGAATTTGATGTTGAGAGAG
AACTTTAAAACTTCCTGAGGTGGAAATGACTTTTTCATTATGCTGTTACTCTAATTCTCT
TTGAAGCAGTGCTAGAATTAGGAGCCTAGGATTAAAAAATGGAAATTTTATTCCCAAGAA
GACTTTCGTGAGAAGGGTTAAAGGAGAGAAAATGTAGTTGGACTCGTTTCTCTTATATTT
GCCTTTGAATTAGCATGCCTGTAAAAAGGTTATTCAGAATATTATTTTTGTCTCTTTATT
TCTTGACATCAGAAATCTGGCTTCCTTAGTTCTCTGGGTAAGAATTCCTCCCCTTGATTT
GTGCCTTATGTGAAACATGTAACAATTTATTTCACTAAGTATATCTTTTTCCTATCTTGT
AGTCAGTTTAAAAAGTTTCTAGGGAGTTTCCTTGGTGGCTCAGCACTAATGTGGCTGTGG
CATAGGCCAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAACCCACATTTATAATACGGGAAAAGATCATCTATAAAGGTGTGGTAGTACTATT
GCTGTCAAGGTGTATACTGATATATGTGGATCAGTCCTCCCAGGGCAGAGATGTTTGTTT
TATTCACTGAGGTACCCTAAGCACCTAAAACAGTGCCAGGTGTAGGGCAGATGCTCAGTA
CATATTTGTAGAATAAATAGTGGGAAGATCTCTGGGACTGGGAGTTGGGCAATCTGGATC
CTAGATATGCCAATTGGCAGAGTACTTGTAGGCCAATCAGAGAATTTGATGTTGAGAGAG
AACTTTAAAACTTCCTGAGGTGGAAATGACTTTTTCATTATGCTGTTACTCTAATTCTCT
TTGAAGCAGTGCTAGAATTAGGAGCCTAGGATTAAAAAATGGAAATTTTATTCCCAAGAA
GACTTTCGTGAGAAGGGTTAAAGGAGAGAAAATGTAGTTGGACTCGTTTCTCTTATATTT
GCCTTTGAATTAGCATGCCTGTAAAAAGGTTATTCAGAATATTATTTTTGTCTCTTTATT
TCTTGACATCAGAAATCTGGCTTCCTTAGTTCTCTGGGTAAGAATTCCTCCCCTTGATTT
GTGCCTTATGTGAAACATGTAACAATTTATTTCACTAAGTATATCTTTTTCCTATCTTGT
AGTCAGTTTAAAAAGTTTCTAGGGAGTTTCCTTGGTGGCTCAGCACTAATGTGGCTGTGG
CATAGGCCAGCA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               199-681, gnl|bosTau2|chr19 (38982299-38982748)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               199-681, gnl|bosTau2|chr19 (38982299-38982748)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               hlv (0.139256)
               

               
               thg (0.126791)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)
               

               
               thg (0.126791)
               

               
               cty (0.10408)