Non-Coding RNA Search

Ss1.1-Mixc-0034l19.3

Sequence:


               
               CTTCCATTTAAAACAGTTATTAAATATATAAAACAAATACACAGGATTTGGTCATTTTCT
GCCATGAATATAGGGCACGTGGGTGCGGGAAGGGAGGAGGGCAGGGGGACGCAAAGAGGG
GAGAGGGCCCCATTTCCCTCCACTCTTGTCTTCCAGGCTGCGGATCCCACCCTGCAGGGC
ACGGGCTTTCATCTGCTTTTAGGAGCCAGAAGCGCGGCACAGACCTGGCTTTTACCACAG
GCTGGGGTCTCTCCGGCGGCCCCCTCCCCGAAAGAAGAACTAACGGTCACTACACACGAA
GCACGCCGGCCGAGTCTCCCGGCGGAAAAGGCACCGAGAGCGCGGACACAGGGCGGACGT
GGGGAGGAGCGGGGCGGGTCACTTGGTCGCCGCCCCCGAGGTGACGGCCGCGGCGGCGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCATTTAAAACAGTTATTAAATATATAAAACAAATACACAGGATTTGGTCATTTTCT
GCCATGAATATAGGGCACGTGGGTGCGGGAAGGGAGGAGGGCAGGGGGACGCAAAGAGGG
GAGAGGGCCCCATTTCCCTCCACTCTTGTCTTCCAGGCTGCGGATCCCACCCTGCAGGGC
ACGGGCTTTCATCTGCTTTTAGGAGCCAGAAGCGCGGCACAGACCTGGCTTTTACCACAG
GCTGGGGTCTCTCCGGCGGCCCCCTCCCCGAAAGAAGAACTAACGGTCACTACACACGAA
GCACGCCGGCCGAGTCTCCCGGCGGAAAAGGCACCGAGAGCGCGGACACAGGGCGGACGT
GGGGAGGAGCGGGGCGGGTCACTTGGTCGCCGCCCCCGAGGTGACGGCCGCGGCGGCGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-370, gnl|bosTau2|chr22 (43746925-43747282)
               

               
               1-370, gnl|Hg17|chr3 (45241243-45241612)
               

               
               1-370, gnl|Mm7|chr9 (122964728-122965078)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-370, gnl|bosTau2|chr22 (43746925-43747282)
               

               
               1-370, gnl|Hg17|chr3 (45241243-45241612)
               

               
               1-370, gnl|Mm7|chr9 (122964728-122965078)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cga (0.279096)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)

	1-370, gnl\|bosTau2\|chr22 (43746925-43747282)
	1-370, gnl\|Hg17\|chr3 (45241243-45241612)
	1-370, gnl\|Mm7\|chr9 (122964728-122965078)