Non-Coding RNA Search

Ss1.1-Mixc-0035c22.3

Sequence:


               
               GGCTGGGCAAGGACTCGCCCTCCAACAAGCTGCTCTACGCCAAGGACATCCCCAGCTACA
AGAGCTGGGTGGAGAGATACTACGCAGACATCGCCAAGCTCCCCGCCATCAGCGACCAGG
ACATGAACGCCTACCTCGCGGAGCAGTCCCGCCTGCACGCCGTGGACTTCAACATGCTCA
GCGCCCTCAGCGAGATCTACTCCTACGTCAGCAAGTACAGCGAAGAGCTCATCGGGGCCC
TAGAGCAGGACGAGCAGGCCCGGCGACAGCGGCTGGCGTACAAGGTAGAACAGCTCATAA
ATGCCATGTCCATCGAGAGCTGAGAGATGGGGAAAGGGGACCCGTGAGAGCTGTCATACT
GGGCGTCTCAGAAGGAAGGACCCTGAAGAGGATCAGCCCCAGAGCTTGCTGTCCCCGAGA
CCCCGTCCCCGGGGACAGGGGAGGGCCCCTCTCCCCACGCCAGCCAAGTTTCGTCACAGC
CGGTCCTGCAGGGAGAGACGGCAGGTGCCCTCCACCCACGGAGAGCACAGGCGGGACGTG
GGGCCCAGAGAAGCCGGTTCTTCAAGCTGAGAGGCACGAGCTGGGCATGGTTCTGCCTCT
GTGACTGCTGCTTTGCATGAAAACTCATTCGATGTATATTGGGGAAATAATGAGAACTTT
ATTTAATTTTTTTTAAGAAAAAGGAAAACCAGAAATAAAACAAACAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGGGCAAGGACTCGCCCTCCAACAAGCTGCTCTACGCCAAGGACATCCCCAGCTACA
AGAGCTGGGTGGAGAGATACTACGCAGACATCGCCAAGCTCCCCGCCATCAGCGACCAGG
ACATGAACGCCTACCTCGCGGAGCAGTCCCGCCTGCACGCCGTGGACTTCAACATGCTCA
GCGCCCTCAGCGAGATCTACTCCTACGTCAGCAAGTACAGCGAAGAGCTCATCGGGGCCC
TAGAGCAGGACGAGCAGGCCCGGCGACAGCGGCTGGCGTACAAGGTAGAACAGCTCATAA
ATGCCATGTCCATCGAGAGCTGAGAGATGGGGAAAGGGGACCCGTGAGAGCTGTCATACT
GGGCGTCTCAGAAGGAAGGACCCTGAAGAGGATCAGCCCCAGAGCTTGCTGTCCCCGAGA
CCCCGTCCCCGGGGACAGGGGAGGGCCCCTCTCCCCACGCCAGCCAAGTTTCGTCACAGC
CGGTCCTGCAGGGAGAGACGGCAGGTGCCCTCCACCCACGGAGAGCACAGGCGGGACGTG
GGGCCCAGAGAAGCCGGTTCTTCAAGCTGAGAGGCACGAGCTGGGCATGGTTCTGCCTCT
GTGACTGCTGCTTTGCATGAAAACTCATTCGATGTATATTGGGGAAATAATGAGAACTTT
ATTTAATTTTTTTTAAGAAAAAGGAAAACCAGAAATAAAACAAACAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|21594771|gb|AAH32125.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21594771|gb|AAH32125.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               75-241, gnl|bosTau2|chr4 (51592632-51592798)
               

               
               75-241, gnl|Hg17|chr7 (131275215-131275049)
               

               
               75-241, gnl|Mm7|chr6 (32084176-32084010)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-241, gnl|bosTau2|chr4 (51592632-51592798)
               

               
               75-241, gnl|Hg17|chr7 (131275215-131275049)
               

               
               75-241, gnl|Mm7|chr6 (32084176-32084010)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pty (0.142714)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)
               

               
               ecc (0.115035)

	75-241, gnl\|bosTau2\|chr4 (51592632-51592798)
	75-241, gnl\|Hg17\|chr7 (131275215-131275049)
	75-241, gnl\|Mm7\|chr6 (32084176-32084010)