Non-Coding RNA Search

Ss1.1-Mixc-0035e08.5

Sequence:


               
               AAAAAAAAGATCAACAGTTTACTTTCCAGTGGTTAAATCTCATAGTCTTGGGCAACTTAT
TCAGCAGTGTGGTTGTCTGGGGCCAATCTAGTGAGATAATCTGATACCTCAACACAAAAA
GGAAGACAGTTTGAGTGAATAATTTGGGTTTTAGGACATTTGAAGACAGAGATCCAATTG
TGAGGTAGACTTTTTGCGGGTCTTCATTTATCTGAGAAAGAGACAATATTACAGGAACCC
CACATCCCATTAAATGGAAAACCAGTTTCGGCTAGGTTTTCTTGTAATTTCCTTTCAGGC
ATGTCTGAGGATTAATCCAGTGGGACGTATTTATCACTTTAGATAAATGGTGCTGCGAGA
ATGCTTGGTTATATTATTTTTAGCCTTGATCAGGGTTTGAACCAATCCTTTCCTTCCTTT
TTAAATGACTGAATGATAGAGTGTTTCACAGTAGGAGAGTGAATTGATCATTTAGTCTGC
TCCATGGCTTTGTAATTGTATCACAGTCTCAAGGCTGCTTGCTGTCAGTTTCCTTCTTCA
TCCATTATGTTGGGGTCTGGGTGACAGCTTTTTTCCTCCAAAGGGGCATAATGCAGTGTT
TGGATGGAAGGAAAATAAAGTGTTATTTTAAACTTGCTGTTTTAATATCTCTAAGGTGCT
GCTCTCTCTTTTTCCTTTGTGCTGCTCCATGAGTTCTTATTACACTGTATGGAGACCACC
CTTGTCTAGAAAGGGAATTGAATTCTGAAAGCTTCAGAGGGGGTTAAAAAACTTTCAGAA
TTTTCTTTGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAAGATCAACAGTTTACTTTCCAGTGGTTAAATCTCATAGTCTTGGGCAACTTAT
TCAGCAGTGTGGTTGTCTGGGGCCAATCTAGTGAGATAATCTGATACCTCAACACAAAAA
GGAAGACAGTTTGAGTGAATAATTTGGGTTTTAGGACATTTGAAGACAGAGATCCAATTG
TGAGGTAGACTTTTTGCGGGTCTTCATTTATCTGAGAAAGAGACAATATTACAGGAACCC
CACATCCCATTAAATGGAAAACCAGTTTCGGCTAGGTTTTCTTGTAATTTCCTTTCAGGC
ATGTCTGAGGATTAATCCAGTGGGACGTATTTATCACTTTAGATAAATGGTGCTGCGAGA
ATGCTTGGTTATATTATTTTTAGCCTTGATCAGGGTTTGAACCAATCCTTTCCTTCCTTT
TTAAATGACTGAATGATAGAGTGTTTCACAGTAGGAGAGTGAATTGATCATTTAGTCTGC
TCCATGGCTTTGTAATTGTATCACAGTCTCAAGGCTGCTTGCTGTCAGTTTCCTTCTTCA
TCCATTATGTTGGGGTCTGGGTGACAGCTTTTTTCCTCCAAAGGGGCATAATGCAGTGTT
TGGATGGAAGGAAAATAAAGTGTTATTTTAAACTTGCTGTTTTAATATCTCTAAGGTGCT
GCTCTCTCTTTTTCCTTTGTGCTGCTCCATGAGTTCTTATTACACTGTATGGAGACCACC
CTTGTCTAGAAAGGGAATTGAATTCTGAAAGCTTCAGAGGGGGTTAAAAAACTTTCAGAA
TTTTCTTTGACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-788, gnl|bosTau2|chr8 (47724559-47723731)
               

               
               7-788, gnl|Hg17|chr11 (117604000-117603161)
               

               
               7-788, gnl|Mm7|chr9 (45010466-45011202)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-788, gnl|bosTau2|chr8 (47724559-47723731)
               

               
               7-788, gnl|Hg17|chr11 (117604000-117603161)
               

               
               7-788, gnl|Mm7|chr9 (45010466-45011202)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	7-788, gnl\|bosTau2\|chr8 (47724559-47723731)
	7-788, gnl\|Hg17\|chr11 (117604000-117603161)
	7-788, gnl\|Mm7\|chr9 (45010466-45011202)