Ss1.1-Mixc-0036b07.5
|
CCGGGACCTGATGGCTGACCTCAAGTCCGAGCTCTCTGGAGACCTGGCAAGGCTGATTCT
GGGGCTTATGATGCCACCAGCCCATTACGATGCCAAGCAGTTGAAGAAGGCCATGGAGGG
AGCCGGCACGGATGAAAAAGCTCTCATTGAAATCTTGGCCACTCGGACCAATGCCGAAAT
CCGGGCCATCAACGAGGCCTATAAGGAGGACTATCACAAGTCCCTGGAGGATGCTCTGAG
CTCAGACACGTCCGGCCACTTCAAGAGGATTCTCATCTCTCTGGCCACGGGGAACCGTGA
GGAGGGAGGAGAAGATCGGACCCGGGCCCAGGAAGACGCCAAGGTGGCTGCTGAGATTTT
GGAAATAGCAGACACATCCAGTGGAGACAAGACTTCCCTGGAGACGCGTTTCATGACGAT
CCTGTGCACGCGTAGCTATCAGCACCTCCGGAGAGTCTTCCAGGAGTTCGTCAAGATGAC
CAACTACGACGTGGAACACACCATCAAGAAGGAGATGTCTGGGGACGTCAGAGACGTGTT
TGTGGCCATCGTTCAAAGTGTCAAGAACAAGCCTCTCTTCTTTGCCGACAAACTTTACAA
ATCCATGAAGGGCGCTGGCACGGACGAGAAAACCCTCACCAGGATCATGATCTCCCGGAG
TGAGATTGACCTGCTCAACATCCGGAGGGAGTTCATTGAGAAATACGACAAGTCTCTCCA
CCAAGCCATTGAGGGCGACACCTCCGGGCACTTCCTGAAGGCCTTACTGGCCATCTGCGG
AGGTGAGGACTAGGACCAGCAGCGCTGGCGGGCACCTCTGCCAAGAAGGGGTCAGCCACA
CACTCGCCTGATGACCCAGCCTGATGCTCCAGCTCCAGAGACTAAGGGTGGGGGGAGGGG
TCAGGGTGGGCTCTTATCTTCGGCTGGGGTTCAGGAAAGGCTCCCACTCCCACAATCCCC
AGAGGGCCCGGCATGGTCACTCCTGCTCACGTCTGAGCGACGAAAGAACCATAGCCATTA
ATCCTGTCCCCTCCCATCTGCCCCCCTCACGCCTTCCCAGCTTCCGCCCCTTGTCACAGC
CTCTGCCCTGGTTTGGGCTTTGTCGAAGCCAAAAACATACTGAGCCTCTGTCTGTGAAAA
AAAAAAAAAAAAAAAAAAAAAAAATGAGGTGGGGTGGTAGGTGCTGGTACCACATAGTAA
AGGGAAGGGAGGAGAATTGACTTCCAGCCAAATGACAGTCCCCCCACCATGTCACCCCCC
CACCACCACCGCTGATTAGAGCTCTGAACCAGGAGTCCCAATACCTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCGGGACCTGATGGCTGACCTCAAGTCCGAGCTCTCTGGAGACCTGGCAAGGCTGATTCT
GGGGCTTATGATGCCACCAGCCCATTACGATGCCAAGCAGTTGAAGAAGGCCATGGAGGG
AGCCGGCACGGATGAAAAAGCTCTCATTGAAATCTTGGCCACTCGGACCAATGCCGAAAT
CCGGGCCATCAACGAGGCCTATAAGGAGGACTATCACAAGTCCCTGGAGGATGCTCTGAG
CTCAGACACGTCCGGCCACTTCAAGAGGATTCTCATCTCTCTGGCCACGGGGAACCGTGA
GGAGGGAGGAGAAGATCGGACCCGGGCCCAGGAAGACGCCAAGGTGGCTGCTGAGATTTT
GGAAATAGCAGACACATCCAGTGGAGACAAGACTTCCCTGGAGACGCGTTTCATGACGAT
CCTGTGCACGCGTAGCTATCAGCACCTCCGGAGAGTCTTCCAGGAGTTCGTCAAGATGAC
CAACTACGACGTGGAACACACCATCAAGAAGGAGATGTCTGGGGACGTCAGAGACGTGTT
TGTGGCCATCGTTCAAAGTGTCAAGAACAAGCCTCTCTTCTTTGCCGACAAACTTTACAA
ATCCATGAAGGGCGCTGGCACGGACGAGAAAACCCTCACCAGGATCATGATCTCCCGGAG
TGAGATTGACCTGCTCAACATCCGGAGGGAGTTCATTGAGAAATACGACAAGTCTCTCCA
CCAAGCCATTGAGGGCGACACCTCCGGGCACTTCCTGAAGGCCTTACTGGCCATCTGCGG
AGGTGAGGACTAGGACCAGCAGCGCTGGCGGGCACCTCTGCCAAGAAGGGGTCAGCCACA
CACTCGCCTGATGACCCAGCCTGATGCTCCAGCTCCAGAGACTAAGGGTGGGGGGAGGGG
TCAGGGTGGGCTCTTATCTTCGGCTGGGGTTCAGGAAAGGCTCCCACTCCCACAATCCCC
AGAGGGCCCGGCATGGTCACTCCTGCTCACGTCTGAGCGACGAAAGAACCATAGCCATTA
ATCCTGTCCCCTCCCATCTGCCCCCCTCACGCCTTCCCAGCTTCCGCCCCTTGTCACAGC
CTCTGCCCTGGTTTGGGCTTTGTCGAAGCCAAAAACATACTGAGCCTCTGTCTGTGAAAA
AAAAAAAAAAAAAAAAAAAAAAAATGAGGTGGGGTGGTAGGTGCTGGTACCACATAGTAA
AGGGAAGGGAGGAGAATTGACTTCCAGCCAAATGACAGTCCCCCCACCATGTCACCCCCC
CACCACCACCGCTGATTAGAGCTCTGAACCAGGAGTCCCAATACCTGG
|
|
gi|34526818|dbj|BAC85290.1| |
Protein identifier
|
gi|34526818|dbj|BAC85290.1| |
|
4-119, gnl|bosTau2|chr7 (43019951-43019836) |
|
4-119, gnl|canFam2|chr4 (61325900-61325739) |
|
4-119, gnl|danRer3|chrNA (225486453-225486334) |
|
4-119, gnl|dasNov1|scaffold_69826 (9630-9470) |
|
4-119, gnl|echTel1|scaffold_320954 (4633-4490) |
|
4-119, gnl|fr1|chrUn (109781496-109781380) |
|
4-119, gnl|hg17|chr5 (150481880-150482041) |
|
4-119, gnl|Hg17|chr5 (150482015-150481900) |
|
4-119, gnl|loxAfr1|scaffold_7860 (49739-49895) |
|
4-119, gnl|mm7|chr11 (54951202-54951363) |
|
4-119, gnl|Mm7|chr11 (54951338-54951223) |
|
4-119, gnl|monDom2|scaffold_6 (55410281-55410123) |
|
4-119, gnl|oryCun1|scaffold_206999 (101445-101608) |
|
4-119, gnl|panTro1|chr4 (157434243-157434404) |
|
4-119, gnl|rheMac2|chr6 (147536961-147537121) |
|
4-119, gnl|rn3|chr10 (40413890-40414036) |
|
4-119, gnl|tetNig1|chr1 (2483459-2483317) |
| |
|
732-1307, gnl|bosTau2|chr7 (43002840-43002246) |
|
732-1307, gnl|Hg17|chr5 (150461263-150460679) |
|
732-1307, gnl|Mm7|chr11 (54936280-54935705) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
4-119, gnl|bosTau2|chr7 (43019951-43019836) |
|
4-119, gnl|canFam2|chr4 (61325900-61325739) |
|
4-119, gnl|danRer3|chrNA (225486453-225486334) |
|
4-119, gnl|dasNov1|scaffold_69826 (9630-9470) |
|
4-119, gnl|echTel1|scaffold_320954 (4633-4490) |
|
4-119, gnl|fr1|chrUn (109781496-109781380) |
|
4-119, gnl|hg17|chr5 (150481880-150482041) |
|
4-119, gnl|Hg17|chr5 (150482015-150481900) |
|
4-119, gnl|loxAfr1|scaffold_7860 (49739-49895) |
|
4-119, gnl|mm7|chr11 (54951202-54951363) |
|
4-119, gnl|Mm7|chr11 (54951338-54951223) |
|
4-119, gnl|monDom2|scaffold_6 (55410281-55410123) |
|
4-119, gnl|oryCun1|scaffold_206999 (101445-101608) |
|
4-119, gnl|panTro1|chr4 (157434243-157434404) |
|
4-119, gnl|rheMac2|chr6 (147536961-147537121) |
|
4-119, gnl|rn3|chr10 (40413890-40414036) |
|
4-119, gnl|tetNig1|chr1 (2483459-2483317) |
| |
|
732-1307, gnl|bosTau2|chr7 (43002840-43002246) |
|
732-1307, gnl|Hg17|chr5 (150461263-150460679) |
|
732-1307, gnl|Mm7|chr11 (54936280-54935705) |
|
mas (0.84122) |
|
cly (0.361925) |
|
jca (0.34188) |
|
cov (0.264306) |
|
ese (0.253004) |
|
nms (0.213858) |
|
hea (0.204499) |
|
eje (0.197668) |
|
nlu (0.191681) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
duo (0.172801) |
|
cli (0.152812) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
eru (0.120048) |
|
clu (0.119646) |
|
med (0.116252) |
|
nbm (0.0993246) |
|
mas (0.84122) |
|
cly (0.361925) |
|
jca (0.34188) |
|
cov (0.264306) |
|
ese (0.253004) |
|
nms (0.213858) |
|
hea (0.204499) |
|
eje (0.197668) |
|
nlu (0.191681) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
duo (0.172801) |
|
cli (0.152812) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
eru (0.120048) |
|
clu (0.119646) |
|
med (0.116252) |
|
nbm (0.0993246) |
