Ss1.1-Mixc-0036g16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCGGCCTACTCGCTCCGGGGACCTCCCTCCGAGGCGACATCGCCTCGCGCGCCGGCCT CTTGAGCCAAGGGGACGTTCTTTTGCAATTCGGCCCTCAGTCAAGGTTTTCTTTTCTTTT GTTTTGTTTCCAAGTTAGGGGCCCCCGAATGTTGTCCAACTCTCCTTCCCTGGACCACTT CCGGTTGCCGGCCCGCGCCTTGTAACTTCGGTTCTGGTGACCTCGGCCCGGAATGCCCCT CGCCTCGTCCCGGGCTCACGTCCCGATCCCGGCTTGAGTGGCCCGGGGTGGGTGACCAGA AGTTTTAGCCTCGCAGCTCTCGAGGCGGATTAATTAGCCCAAGAAACATTATATTCATTT TTCTGGATATGCCGCAGAAGGATCCGTGCCAGAAACAAGCCTGTGAAATACAGAAATGTT TACAAGCCAATAACTACATGGAATCTAAGTGTCAGGCTGTCATCCAAGAACTGCGTAAGT GTTGTGCCCGGTACCCCACGGGGAGATCTCGCGTCTGTTCGGGATTTGAGAAAGAAGAGG AAGACCAACTGCCGCCGAAGCCCGCCTCACAGTAAAGTTCTGCTGACCAGTTGGATGCTG CTCCTCATTCCCACCACGCGGGGTTTATTTCTCCTCCTGACTCTGTCTTCAGGCCAGGTA GCAGCAAATAGCCAGTGAAAATGTCAACTGTAAAGGTTAATATGCCATCTATGCAGAACA AATACGAATACATTGAACAAATTTGTACAATGTAATAAACAGCTGCTAAAATAAATCTTT TAAGTGAGAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCGGCCTACTCGCTCCGGGGACCTCCCTCCGAGGCGACATCGCCTCGCGCGCCGGCCT CTTGAGCCAAGGGGACGTTCTTTTGCAATTCGGCCCTCAGTCAAGGTTTTCTTTTCTTTT GTTTTGTTTCCAAGTTAGGGGCCCCCGAATGTTGTCCAACTCTCCTTCCCTGGACCACTT CCGGTTGCCGGCCCGCGCCTTGTAACTTCGGTTCTGGTGACCTCGGCCCGGAATGCCCCT CGCCTCGTCCCGGGCTCACGTCCCGATCCCGGCTTGAGTGGCCCGGGGTGGGTGACCAGA AGTTTTAGCCTCGCAGCTCTCGAGGCGGATTAATTAGCCCAAGAAACATTATATTCATTT TTCTGGATATGCCGCAGAAGGATCCGTGCCAGAAACAAGCCTGTGAAATACAGAAATGTT TACAAGCCAATAACTACATGGAATCTAAGTGTCAGGCTGTCATCCAAGAACTGCGTAAGT GTTGTGCCCGGTACCCCACGGGGAGATCTCGCGTCTGTTCGGGATTTGAGAAAGAAGAGG AAGACCAACTGCCGCCGAAGCCCGCCTCACAGTAAAGTTCTGCTGACCAGTTGGATGCTG CTCCTCATTCCCACCACGCGGGGTTTATTTCTCCTCCTGACTCTGTCTTCAGGCCAGGTA GCAGCAAATAGCCAGTGAAAATGTCAACTGTAAAGGTTAATATGCCATCTATGCAGAACA AATACGAATACATTGAACAAATTTGTACAATGTAATAAACAGCTGCTAAAATAAATCTTT TAAGTGAGAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-358, gnl|bosTau2|chrX (13163230-13163570) | |
| 1-358, gnl|canFam2|chrX (126100886-126101211) | |
| 1-358, gnl|dasNov1|scaffold_116155 (3533-3877) | |
| 1-358, gnl|hg17|chrX (153862648-153862990) | |
| 1-358, gnl|Hg17|chrX (153863030-153862673) | |
| 1-358, gnl|mm7|chrX (70802639-70802942) | |
| 1-358, gnl|Mm7|chrX (70802982-70802664) | |
| 1-358, gnl|oryCun1|scaffold_170787 (5992-5652) | |
| 1-358, gnl|panTro1|chrX (159161789-159162131) | |
| 1-358, gnl|rn3|chr18 (107316-107022) | |
| 417-787, gnl|bosTau2|chrX (13174310-13174681) | |
| 417-787, gnl|canFam2|chrX (126091400-126091831) | |
| 417-787, gnl|danRer3|chrNA (17397984-17398521) | |
| 417-787, gnl|dasNov1|scaffold_43939 (6586-7013) | |
| 417-787, gnl|echTel1|scaffold_289318 (54430-54001) | |
| 417-787, gnl|hg17|chrX (153853572-153853998) | |
| 417-787, gnl|Hg17|chrX (153853980-153853605) | |
| 417-787, gnl|loxAfr1|scaffold_103933 (628-176) | |
| 417-787, gnl|mm7|chrX (70791465-70791891) | |
| 417-787, gnl|Mm7|chrX (70791874-70791496) | |
| 417-787, gnl|monDom2|scaffold_306 (38450-38885) | |
| 417-787, gnl|oryCun1|scaffold_174838 (19416-19038) | |
| 417-787, gnl|panTro1|chrX (159152767-159153192) | |
| 417-787, gnl|rheMac2|chrX (153083701-153084129) | |
| 417-787, gnl|rn3|chr18 (112360-111991) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-358, gnl|bosTau2|chrX (13163230-13163570) | |
| 1-358, gnl|canFam2|chrX (126100886-126101211) | |
| 1-358, gnl|dasNov1|scaffold_116155 (3533-3877) | |
| 1-358, gnl|hg17|chrX (153862648-153862990) | |
| 1-358, gnl|Hg17|chrX (153863030-153862673) | |
| 1-358, gnl|mm7|chrX (70802639-70802942) | |
| 1-358, gnl|Mm7|chrX (70802982-70802664) | |
| 1-358, gnl|oryCun1|scaffold_170787 (5992-5652) | |
| 1-358, gnl|panTro1|chrX (159161789-159162131) | |
| 1-358, gnl|rn3|chr18 (107316-107022) | |
| 417-787, gnl|bosTau2|chrX (13174310-13174681) | |
| 417-787, gnl|canFam2|chrX (126091400-126091831) | |
| 417-787, gnl|danRer3|chrNA (17397984-17398521) | |
| 417-787, gnl|dasNov1|scaffold_43939 (6586-7013) | |
| 417-787, gnl|echTel1|scaffold_289318 (54430-54001) | |
| 417-787, gnl|hg17|chrX (153853572-153853998) | |
| 417-787, gnl|Hg17|chrX (153853980-153853605) | |
| 417-787, gnl|loxAfr1|scaffold_103933 (628-176) | |
| 417-787, gnl|mm7|chrX (70791465-70791891) | |
| 417-787, gnl|Mm7|chrX (70791874-70791496) | |
| 417-787, gnl|monDom2|scaffold_306 (38450-38885) | |
| 417-787, gnl|oryCun1|scaffold_174838 (19416-19038) | |
| 417-787, gnl|panTro1|chrX (159152767-159153192) | |
| 417-787, gnl|rheMac2|chrX (153083701-153084129) | |
| 417-787, gnl|rn3|chr18 (112360-111991) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sto (0.359648) | |
| csp (0.161186) | |
| ldo (0.0970026) |