Ss1.1-Mixc-0036l10.5
|
CGCACACCACCGAGGAGAAGGAGCTCAACGTGACCCTCAGCTCCATGTCCCGCGGGGGGT
TCAAGTCCCACGTGGTGCGGCTGACCAACCACCAAGTGAAAGGCCTGGAGGAGGAGCTGC
AGTTTTCCTTGGGCAGCAAGATTAATGTGAAGGTGGGAGGAAACAGCAAAGGAACCTTGA
AGATCCTCCGTGCCTACAATGTCATAGACCTGAAGAACACCACCTGCCAGGACCTTCAGA
TCGAAGTGACGGTCAAGGGCCACGTCGAGTACATGTTGGAGGCGAACGAGGACTACGAGG
ACTACGAGTACGAGGACCTTCCTGCCCAGGATGACCCTGGGGCCCACTCCCAGCCCGTGA
CGCCCCTGCAGCTGTTTGACGGCCGGAGGAACCGCCGCAGGAGGGAGGCACCCAAGGTGG
CCGAAGAGCAGGAATCCAGGGTGCAGTACACCGTGTGCATCTGGCGGAACGGCCAGGTGG
GGCTGTCGGGCATGGCCATCGCGGACATCACCCTCCTGAGTGGATTCTATGCCGAGCGGG
CTGACCTGGAGAAGCTGACCTCCCTCTCTGACCGGTACGTCAGTCACTTTGAGACCGAGG
GGCCCCATGTCCTGCTGTACTTCGACTCGGTCCCTACCTCCCGGGAGTGTGTGGGCTTTG
GAGCCGTGCAGGAGGTGGCCATCGGGCTGGTGCAGCCGGCCAGCGCCGTCCTGTACGACT
ACTACAACCCCGAGCACAAATGTTCTGTGTTTTACGGGGCGCCAAGTAAGAGCAAATTCT
TGTCCACATTGTGCTCGGCTGATGTCTGCCAGTGCGCCGAGGGCAAGTGCCCTAGACAGC
GCCGGGCCCTGGAGCGGGGGCTGCAGGACCTGGATGGTTACAGGATGAAGTTTGCCTGCT
ACTCGCCCCGCGTGGATTACGCCTTCCAGGTGAAGGTTCTCCGAGAAGACAGCAGAGCTG
CTTTCCGCCTCTTTGAGACGAGCATCACCCAAGTCCTACATTTCACTAAGGATGTCAAGG
CCGCTGCTGCTCAGGCCCGAAACTTCCTGGTGCGAGCCTCTTGCCGCCTTCACTTAGAAC
CTGGGAAAGAATATCTGATCATGGGCCTGGACGGGACCACCCACGACCTCAAGGGAGACC
CCCAGTACCTGCTGGACTCGAACTGCTGGATCGAGGAGATGCCCTCTGAGCGCCTGTGCC
GGAGCACCCGCCATCGGGAGCCCTGTGCCCAGCTCAGAGACTTCATCCAGGAGTACAGCA
CGCAGGGCTGCCAGGTGTAAGGGCTGCTCTGCTGCCTCCTCCAGGAAAAGTCACCCCTGG
ATCCTTGCTTGGCCCAGTCCCCTGAACATAGCCCCGGGCAGGAGCAGGCACCCAATAAAG
GCTTTTGGCAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCACACCACCGAGGAGAAGGAGCTCAACGTGACCCTCAGCTCCATGTCCCGCGGGGGGT
TCAAGTCCCACGTGGTGCGGCTGACCAACCACCAAGTGAAAGGCCTGGAGGAGGAGCTGC
AGTTTTCCTTGGGCAGCAAGATTAATGTGAAGGTGGGAGGAAACAGCAAAGGAACCTTGA
AGATCCTCCGTGCCTACAATGTCATAGACCTGAAGAACACCACCTGCCAGGACCTTCAGA
TCGAAGTGACGGTCAAGGGCCACGTCGAGTACATGTTGGAGGCGAACGAGGACTACGAGG
ACTACGAGTACGAGGACCTTCCTGCCCAGGATGACCCTGGGGCCCACTCCCAGCCCGTGA
CGCCCCTGCAGCTGTTTGACGGCCGGAGGAACCGCCGCAGGAGGGAGGCACCCAAGGTGG
CCGAAGAGCAGGAATCCAGGGTGCAGTACACCGTGTGCATCTGGCGGAACGGCCAGGTGG
GGCTGTCGGGCATGGCCATCGCGGACATCACCCTCCTGAGTGGATTCTATGCCGAGCGGG
CTGACCTGGAGAAGCTGACCTCCCTCTCTGACCGGTACGTCAGTCACTTTGAGACCGAGG
GGCCCCATGTCCTGCTGTACTTCGACTCGGTCCCTACCTCCCGGGAGTGTGTGGGCTTTG
GAGCCGTGCAGGAGGTGGCCATCGGGCTGGTGCAGCCGGCCAGCGCCGTCCTGTACGACT
ACTACAACCCCGAGCACAAATGTTCTGTGTTTTACGGGGCGCCAAGTAAGAGCAAATTCT
TGTCCACATTGTGCTCGGCTGATGTCTGCCAGTGCGCCGAGGGCAAGTGCCCTAGACAGC
GCCGGGCCCTGGAGCGGGGGCTGCAGGACCTGGATGGTTACAGGATGAAGTTTGCCTGCT
ACTCGCCCCGCGTGGATTACGCCTTCCAGGTGAAGGTTCTCCGAGAAGACAGCAGAGCTG
CTTTCCGCCTCTTTGAGACGAGCATCACCCAAGTCCTACATTTCACTAAGGATGTCAAGG
CCGCTGCTGCTCAGGCCCGAAACTTCCTGGTGCGAGCCTCTTGCCGCCTTCACTTAGAAC
CTGGGAAAGAATATCTGATCATGGGCCTGGACGGGACCACCCACGACCTCAAGGGAGACC
CCCAGTACCTGCTGGACTCGAACTGCTGGATCGAGGAGATGCCCTCTGAGCGCCTGTGCC
GGAGCACCCGCCATCGGGAGCCCTGTGCCCAGCTCAGAGACTTCATCCAGGAGTACAGCA
CGCAGGGCTGCCAGGTGTAAGGGCTGCTCTGCTGCCTCCTCCAGGAAAAGTCACCCCTGG
ATCCTTGCTTGGCCCAGTCCCCTGAACATAGCCCCGGGCAGGAGCAGGCACCCAATAAAG
GCTTTTGGCAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
3-122, gnl|bosTau2|chr23 (23650412-23650293) |
|
3-122, gnl|Hg17|chr6 (32105685-32105804) |
|
3-122, gnl|Mm7|chr17 (32818988-32818869) |
| |
|
277-464, gnl|bosTau2|chr23 (23648535-23648348) |
|
277-464, gnl|Hg17|chr6 (32107498-32107685) |
|
277-464, gnl|Mm7|chr17 (32817134-32816953) |
| |
|
629-730, gnl|bosTau2|chr23 (23646546-23646445) |
|
629-730, gnl|Hg17|chr6 (32109545-32109646) |
|
629-730, gnl|Mm7|chr17 (32816052-32815951) |
| |
|
1008-1138, gnl|bosTau2|chr23 (23645483-23645353) |
|
1008-1138, gnl|Hg17|chr6 (32110618-32110748) |
|
1008-1138, gnl|Mm7|chr17 (32815040-32814910) |
| |
|
1139-1388, gnl|bosTau2|chr23 (23645211-23644947) |
|
1139-1388, gnl|Hg17|chr6 (32110892-32111152) |
|
1139-1388, gnl|Mm7|chr17 (32814772-32814517) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-122, gnl|bosTau2|chr23 (23650412-23650293) |
|
3-122, gnl|Hg17|chr6 (32105685-32105804) |
|
3-122, gnl|Mm7|chr17 (32818988-32818869) |
| |
|
277-464, gnl|bosTau2|chr23 (23648535-23648348) |
|
277-464, gnl|Hg17|chr6 (32107498-32107685) |
|
277-464, gnl|Mm7|chr17 (32817134-32816953) |
| |
|
629-730, gnl|bosTau2|chr23 (23646546-23646445) |
|
629-730, gnl|Hg17|chr6 (32109545-32109646) |
|
629-730, gnl|Mm7|chr17 (32816052-32815951) |
| |
|
1008-1138, gnl|bosTau2|chr23 (23645483-23645353) |
|
1008-1138, gnl|Hg17|chr6 (32110618-32110748) |
|
1008-1138, gnl|Mm7|chr17 (32815040-32814910) |
| |
|
1139-1388, gnl|bosTau2|chr23 (23645211-23644947) |
|
1139-1388, gnl|Hg17|chr6 (32110892-32111152) |
|
1139-1388, gnl|Mm7|chr17 (32814772-32814517) |
|
cli (2.13936) |
|
cag (2.11672) |
|
cov (1.45368) |
|
cly (0.965135) |
|
csp (0.644745) |
|
lnt (0.569233) |
|
jca (0.45584) |
|
col (0.390016) |
|
clu (0.358938) |
|
ill (0.351185) |
|
pty (0.285429) |
|
cty (0.20816) |
|
nep (0.183925) |
|
rec (0.17307) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
cje (0.165235) |
|
eli (0.151814) |
|
fat (0.147427) |
|
hyp (0.142837) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
sug (0.127291) |
|
jej (0.0989218) |
|
cli (2.13936) |
|
cag (2.11672) |
|
cov (1.45368) |
|
cly (0.965135) |
|
csp (0.644745) |
|
lnt (0.569233) |
|
jca (0.45584) |
|
col (0.390016) |
|
clu (0.358938) |
|
ill (0.351185) |
|
pty (0.285429) |
|
cty (0.20816) |
|
nep (0.183925) |
|
rec (0.17307) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
cje (0.165235) |
|
eli (0.151814) |
|
fat (0.147427) |
|
hyp (0.142837) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
sug (0.127291) |
|
jej (0.0989218) |
