Non-Coding RNA Search

Ss1.1-Mixc-0037,a09.5

Sequence:


               
               GGTTGATTCAGGAACTGTACATAACTGCTCTATTTTGGTTCATTTCCAAGAGTTACAGTT
CCTCATTTACTGGAGAAAGTAGACAGATGCTAGAGTGGTAACTCAGCTGCCACCAGCAAG
GAAATGCCCGGCCTAGGGCATTTTGGTCTAGGTGCCCTAGTGATCACCAGGCACCCCTCG
CATCAATTCTATGCTCTGCTTCTAAATGGGGACGGTGCGTGTGTGAGGGGTGGGCCCAGG
GACGGGAGGGGCAGGAAGAGGAGAGAAATGAAGACCGGTTTTCTAGGTGAGAGAAAACAA
GAAGCCACGAAGTTGGGAAGAAGCCACGAAAATGACACGCATGCTCTATGGTCCATCAGG
CCAATTACATCTCTGATTAGGGCGTTTATAAAATGCGCCCTTGTCTCTAACATACACGCA
GGTCTAGTCAACAAACGTCAGGAAGCAGAGTTGGTGGGACAGTGCATGGGGAGCACTGAC
TGTCCTTTTCGTTTTGTTTCCTTTGTCCCAAGCCTGGATTATAAAATGCATCAAGTAAAA
CATAGACTAAACACTGAGGAAGAAAAAGGGAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTGATTCAGGAACTGTACATAACTGCTCTATTTTGGTTCATTTCCAAGAGTTACAGTT
CCTCATTTACTGGAGAAAGTAGACAGATGCTAGAGTGGTAACTCAGCTGCCACCAGCAAG
GAAATGCCCGGCCTAGGGCATTTTGGTCTAGGTGCCCTAGTGATCACCAGGCACCCCTCG
CATCAATTCTATGCTCTGCTTCTAAATGGGGACGGTGCGTGTGTGAGGGGTGGGCCCAGG
GACGGGAGGGGCAGGAAGAGGAGAGAAATGAAGACCGGTTTTCTAGGTGAGAGAAAACAA
GAAGCCACGAAGTTGGGAAGAAGCCACGAAAATGACACGCATGCTCTATGGTCCATCAGG
CCAATTACATCTCTGATTAGGGCGTTTATAAAATGCGCCCTTGTCTCTAACATACACGCA
GGTCTAGTCAACAAACGTCAGGAAGCAGAGTTGGTGGGACAGTGCATGGGGAGCACTGAC
TGTCCTTTTCGTTTTGTTTCCTTTGTCCCAAGCCTGGATTATAAAATGCATCAAGTAAAA
CATAGACTAAACACTGAGGAAGAAAAAGGGAAAAAA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               2-308, gnl|bosTau2|chr29 (37615589-37615273)
               

               
               2-308, gnl|Hg17|chr6 (44904579-44904914)
               


               
               351-567, gnl|bosTau2|chr29 (37615183-37614965)
               

               
               351-567, gnl|Hg17|chr6 (44905002-44905206)
               

               
               351-567, gnl|Mm7|chr17 (43243459-43243240)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-308, gnl|bosTau2|chr29 (37615589-37615273)
               

               
               2-308, gnl|Hg17|chr6 (44904579-44904914)
               


               
               351-567, gnl|bosTau2|chr29 (37615183-37614965)
               

               
               351-567, gnl|Hg17|chr6 (44905002-44905206)
               

               
               351-567, gnl|Mm7|chr17 (43243459-43243240)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	2-308, gnl\|bosTau2\|chr29 (37615589-37615273)
	2-308, gnl\|Hg17\|chr6 (44904579-44904914)

	351-567, gnl\|bosTau2\|chr29 (37615183-37614965)
	351-567, gnl\|Hg17\|chr6 (44905002-44905206)
	351-567, gnl\|Mm7\|chr17 (43243459-43243240)