Non-Coding RNA Search

Ss1.1-Mixc-0037,i03.5

Sequence:


               
               CCTGGGCCTGTGCTCGGTGAGTGACTTGTCAGAGCTGATGTGGTGACCAGAGAACATTGG
TATTTCCTCTGAGCTTCTAGCTGGAAGATGCCTGGGAAGCAATCACTGAAGCTCTACCTT
AGCTCCCGAGAGCTGGGTCCTCTTCAAGAGACCCATTTTCTATCCCCTGAGGCTCCCTGG
CTTTGGGAGGACAACGTGGAGACTGCTCCTTCAATCAGGGTCCAGAGCCTCCCCCCAGGC
ACGTCCTCAGACCTGTAGCCATCTTGCAGCATAGCAGGAAGGCCATGAACTTTTGGTCTG
TTCTTGAGGCTTCTTATATATGAATGTTGTTAATGTCTTTTAACCTAAATTGCTAGTCCC
TTGGATCTCTTAGTTTGGCCAGTTCTGTTGTGTCTGTACCTCATTAAAGACTTCTGCACA
AGCCTTTTTTAAAAAGTAACCCTAGACTGGGTTTCATGCCTCATTGTTCCTACAGCAGAG
TGGATAGAAGAGGTGTAGTTAGTCATCCCTCCACAAATGTGGTGCTTCTGATGGGATCCT
CTACACATCACATGCTGTGCAGGTGAATTTCTCACTGTTCAGATAGGTCGTCAGTAAAAC
ACATCACTTCAAGATGGTCCATTTGAATTGAAGTTTGGGCTCTTATCTCCTTTGTGATGA
ATTCTGTAGTGAAGACTGAAGCTGTCACTGTCATTTATGGGCAGCATGTCTATTGACTAG
TGGGCCTAAGAGCCAAGTAGGAAAGGGCAACATATTATGTGAGGCAAGCTGGAAATGCTA
CAGTGTCACCATGAGCAAGTCTGGTGTCTTGTCACTGCCCCTGGGACTGGCTGGAATTTC
CCAAGGCGCTGGCCCAGGACACCACACCCGCTCCTTTTGGTTTTAGGTCAGCCTATTCAG
GCTCTCATCTGGCCTACAGATGATTTTTCAAGGGTCTACAAACAGTGGGCTGGTCATCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGGCCTGTGCTCGGTGAGTGACTTGTCAGAGCTGATGTGGTGACCAGAGAACATTGG
TATTTCCTCTGAGCTTCTAGCTGGAAGATGCCTGGGAAGCAATCACTGAAGCTCTACCTT
AGCTCCCGAGAGCTGGGTCCTCTTCAAGAGACCCATTTTCTATCCCCTGAGGCTCCCTGG
CTTTGGGAGGACAACGTGGAGACTGCTCCTTCAATCAGGGTCCAGAGCCTCCCCCCAGGC
ACGTCCTCAGACCTGTAGCCATCTTGCAGCATAGCAGGAAGGCCATGAACTTTTGGTCTG
TTCTTGAGGCTTCTTATATATGAATGTTGTTAATGTCTTTTAACCTAAATTGCTAGTCCC
TTGGATCTCTTAGTTTGGCCAGTTCTGTTGTGTCTGTACCTCATTAAAGACTTCTGCACA
AGCCTTTTTTAAAAAGTAACCCTAGACTGGGTTTCATGCCTCATTGTTCCTACAGCAGAG
TGGATAGAAGAGGTGTAGTTAGTCATCCCTCCACAAATGTGGTGCTTCTGATGGGATCCT
CTACACATCACATGCTGTGCAGGTGAATTTCTCACTGTTCAGATAGGTCGTCAGTAAAAC
ACATCACTTCAAGATGGTCCATTTGAATTGAAGTTTGGGCTCTTATCTCCTTTGTGATGA
ATTCTGTAGTGAAGACTGAAGCTGTCACTGTCATTTATGGGCAGCATGTCTATTGACTAG
TGGGCCTAAGAGCCAAGTAGGAAAGGGCAACATATTATGTGAGGCAAGCTGGAAATGCTA
CAGTGTCACCATGAGCAAGTCTGGTGTCTTGTCACTGCCCCTGGGACTGGCTGGAATTTC
CCAAGGCGCTGGCCCAGGACACCACACCCGCTCCTTTTGGTTTTAGGTCAGCCTATTCAG
GCTCTCATCTGGCCTACAGATGATTTTTCAAGGGTCTACAAACAGTGGGCTGGTCATCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-957, gnl|bosTau2|chr26 (8567911-8566937)
               

               
               1-957, gnl|Hg17|chr10 (98737714-98738566)
               

               
               1-957, gnl|Mm7|chr19 (41483041-41483922)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-957, gnl|bosTau2|chr26 (8567911-8566937)
               

               
               1-957, gnl|Hg17|chr10 (98737714-98738566)
               

               
               1-957, gnl|Mm7|chr19 (41483041-41483922)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	1-957, gnl\|bosTau2\|chr26 (8567911-8566937)
	1-957, gnl\|Hg17\|chr10 (98737714-98738566)
	1-957, gnl\|Mm7\|chr19 (41483041-41483922)