Non-Coding RNA Search

Ss1.1-Mixc-0037,o03.5

Sequence:


               
               CTTCCTCTGTCTCTGCTTAGCTGAACCGGGAGGGAAAGCTCCGGTGTCGCTGCAGAAACC
TCCTTAGAGCAGAACTCTCTGGTGGTCACCTATGTAGAGGAAGAGCTCGTGTGCTTTTCT
GTAAGTCAGGCTCTTAGAAGCCAAGTTCTCATCACTTTTAGGGCAGGGTCGGCAGGCGTT
CTCTATAAAGAGCAGAGATGGCAGGTCCCACTGCTGCAGAGGGCAACGGCTGTGTAGATA
ACGGTGTGTATGGTCCAGGGGGCTCCCTGGGAGCCAGGCGGGCGATCACTGTCTGTCACT
GGAGCAGGTGGGCGACCTCACTCACACTTGGACAAGCCGTGGTCAAGAGTCTCCCTAATC
TGAGGGGCTTCAAGGTCTCAATAGTTTCTGATTACTCTTGCCCTCAGCCTTAGCAACTGG
AATCTAATGTATAATATACATTTTTATATTATTTGGGATTTTTTTTCCTCTCATAAGTTT
AAGCACTACTGTTCTTCAAGAAAGTTGGAAGCTTTTCCTACCTTTTAGCCTCCAGGATGA
GGAAATTTGTTTGGATTATAGAAATTTGCCCTGAGCCTAACTCTGCTGAGTTAACTTGGT
AGAGCTGTGATTGCTTCCGGTTCTGAGAAGTGGGATCACGAGCCACTGGATCGCCTTGAT
GGAGACAGTAATTCTGGCACTGTCCAGGATTTCTCTTCATCAGAGAGGTGTCTTGAGACC
CCTGCTCTCGTTATCTCATGTCTGGGTATGATAGACAGTGATGAGGACCTCACTAACTAT
TTTGTGTTTACTTTTTCTATGTGTAAAGCTTTGCCGTAGTTTTTAAAGTGTAATTTATTT
TTATATCAAGTGCACTATTCATGCAGCGTGTTCCACGGTTTTATATGACTTGTACTAGAA
GCACTGCACTGAACTGTGATCGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCTCTGTCTCTGCTTAGCTGAACCGGGAGGGAAAGCTCCGGTGTCGCTGCAGAAACC
TCCTTAGAGCAGAACTCTCTGGTGGTCACCTATGTAGAGGAAGAGCTCGTGTGCTTTTCT
GTAAGTCAGGCTCTTAGAAGCCAAGTTCTCATCACTTTTAGGGCAGGGTCGGCAGGCGTT
CTCTATAAAGAGCAGAGATGGCAGGTCCCACTGCTGCAGAGGGCAACGGCTGTGTAGATA
ACGGTGTGTATGGTCCAGGGGGCTCCCTGGGAGCCAGGCGGGCGATCACTGTCTGTCACT
GGAGCAGGTGGGCGACCTCACTCACACTTGGACAAGCCGTGGTCAAGAGTCTCCCTAATC
TGAGGGGCTTCAAGGTCTCAATAGTTTCTGATTACTCTTGCCCTCAGCCTTAGCAACTGG
AATCTAATGTATAATATACATTTTTATATTATTTGGGATTTTTTTTCCTCTCATAAGTTT
AAGCACTACTGTTCTTCAAGAAAGTTGGAAGCTTTTCCTACCTTTTAGCCTCCAGGATGA
GGAAATTTGTTTGGATTATAGAAATTTGCCCTGAGCCTAACTCTGCTGAGTTAACTTGGT
AGAGCTGTGATTGCTTCCGGTTCTGAGAAGTGGGATCACGAGCCACTGGATCGCCTTGAT
GGAGACAGTAATTCTGGCACTGTCCAGGATTTCTCTTCATCAGAGAGGTGTCTTGAGACC
CCTGCTCTCGTTATCTCATGTCTGGGTATGATAGACAGTGATGAGGACCTCACTAACTAT
TTTGTGTTTACTTTTTCTATGTGTAAAGCTTTGCCGTAGTTTTTAAAGTGTAATTTATTT
TTATATCAAGTGCACTATTCATGCAGCGTGTTCCACGGTTTTATATGACTTGTACTAGAA
GCACTGCACTGAACTGTGATCGTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               311-919, gnl|bosTau2|chr2 (43545267-43545894)
               

               
               311-919, gnl|Hg17|chr2 (120652116-120652857)
               

               
               311-919, gnl|Mm7|chr1 (119406194-119405617)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               311-919, gnl|bosTau2|chr2 (43545267-43545894)
               

               
               311-919, gnl|Hg17|chr2 (120652116-120652857)
               

               
               311-919, gnl|Mm7|chr1 (119406194-119405617)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               fbs (0.175346)
               

               
               che (0.136314)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               fbs (0.175346)
               

               
               che (0.136314)

	311-919, gnl\|bosTau2\|chr2 (43545267-43545894)
	311-919, gnl\|Hg17\|chr2 (120652116-120652857)
	311-919, gnl\|Mm7\|chr1 (119406194-119405617)