Ss1.1-Mixc-0040,j07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGTCTCAAGATGGCGGCCAATGTGGGATCGATGTTTCAATATTGGAAGCGCTTTGATTT ACAGCAGCTGCAGAGGGAACTCGATGCCACCGCAACAGTATTGGCGAACCGGCAAGATGA AAGCGAGCAGTCCAGAAAGCGGCTCATTGAGCAGAGCCGCGAGTTCAAGAAGAACACTCC AGAGGATTTGCGCAAGCAGGTAGCGCCGCTGCTGAAGAGCTTCCAAGGGGAGATTGATGC ACTGAGTAAAAGAAGCAAAGAAGCTGAGGCAGCCTTCTTGAATGTCTACAAAAGATTGAT CGATGTTCCAGACCCCGTACCAGCTCTGGACCTCGGGCAGCAGCTCCAACTCAAGGTACA GCGCCTACACGACATCGAAACGGAGAACCAGAAACTTAGGGAAACGCTGGACGAATACAA CAAAGAGTTTGCTGAAGTGAAAAATCAAGAGGTTACGATAAAAGCACTTAAAGAGAAAAT CCGAGAATATGAACAGACTCTGAAGAACCAAGCAGAGACCATAGCTCTCGAAAAGGAACA AAAGTTACAAAATGATTTTGCGGAAAAAGAGAGAAAGCTACAAGAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGTCTCAAGATGGCGGCCAATGTGGGATCGATGTTTCAATATTGGAAGCGCTTTGATTT ACAGCAGCTGCAGAGGGAACTCGATGCCACCGCAACAGTATTGGCGAACCGGCAAGATGA AAGCGAGCAGTCCAGAAAGCGGCTCATTGAGCAGAGCCGCGAGTTCAAGAAGAACACTCC AGAGGATTTGCGCAAGCAGGTAGCGCCGCTGCTGAAGAGCTTCCAAGGGGAGATTGATGC ACTGAGTAAAAGAAGCAAAGAAGCTGAGGCAGCCTTCTTGAATGTCTACAAAAGATTGAT CGATGTTCCAGACCCCGTACCAGCTCTGGACCTCGGGCAGCAGCTCCAACTCAAGGTACA GCGCCTACACGACATCGAAACGGAGAACCAGAAACTTAGGGAAACGCTGGACGAATACAA CAAAGAGTTTGCTGAAGTGAAAAATCAAGAGGTTACGATAAAAGCACTTAAAGAGAAAAT CCGAGAATATGAACAGACTCTGAAGAACCAAGCAGAGACCATAGCTCTCGAAAAGGAACA AAAGTTACAAAATGATTTTGCGGAAAAAGAGAGAAAGCTACAAGAGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 71-185, gnl|bosTau2|chr25 (31851173-31851287) | |
| 71-185, gnl|Hg17|chr7 (101152827-101152941) | |
| 71-185, gnl|Mm7|chr5 (135457134-135457020) | |
| 448-573, gnl|bosTau2|chr25 (31985062-31985187) | |
| 448-573, gnl|canFam2|chr6 (10970273-10970142) | |
| 448-573, gnl|danRer3|chrNA (204412174-204412344) | |
| 448-573, gnl|dasNov1|scaffold_5206 (37162-37293) | |
| 448-573, gnl|fr1|chrUn (268361840-268361712) | |
| 448-573, gnl|galGal2|chr19 (3735836-3735967) | |
| 448-573, gnl|hg17|chr7 (101341049-101341180) | |
| 448-573, gnl|Hg17|chr7 (101341049-101341174) | |
| 448-573, gnl|mm7|chr5 (135341525-135341394) | |
| 448-573, gnl|Mm7|chr5 (135341523-135341398) | |
| 448-573, gnl|monDom2|scaffold_77 (4123590-4123721) | |
| 448-573, gnl|oryCun1|scaffold_141088 (17379-17510) | |
| 448-573, gnl|panTro1|chr6 (103130142-103130273) | |
| 448-573, gnl|rheMac2|chr3 (49412457-49412588) | |
| 448-573, gnl|rn3|chr12 (21411338-21411469) | |
| 448-573, gnl|tetNig1|chr16 (1896938-1897066) | |
| 448-573, gnl|xenTro1|scaffold_1170 (215378-215247) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 71-185, gnl|bosTau2|chr25 (31851173-31851287) | |
| 71-185, gnl|Hg17|chr7 (101152827-101152941) | |
| 71-185, gnl|Mm7|chr5 (135457134-135457020) | |
| 448-573, gnl|bosTau2|chr25 (31985062-31985187) | |
| 448-573, gnl|canFam2|chr6 (10970273-10970142) | |
| 448-573, gnl|danRer3|chrNA (204412174-204412344) | |
| 448-573, gnl|dasNov1|scaffold_5206 (37162-37293) | |
| 448-573, gnl|fr1|chrUn (268361840-268361712) | |
| 448-573, gnl|galGal2|chr19 (3735836-3735967) | |
| 448-573, gnl|hg17|chr7 (101341049-101341180) | |
| 448-573, gnl|Hg17|chr7 (101341049-101341174) | |
| 448-573, gnl|mm7|chr5 (135341525-135341394) | |
| 448-573, gnl|Mm7|chr5 (135341523-135341398) | |
| 448-573, gnl|monDom2|scaffold_77 (4123590-4123721) | |
| 448-573, gnl|oryCun1|scaffold_141088 (17379-17510) | |
| 448-573, gnl|panTro1|chr6 (103130142-103130273) | |
| 448-573, gnl|rheMac2|chr3 (49412457-49412588) | |
| 448-573, gnl|rn3|chr12 (21411338-21411469) | |
| 448-573, gnl|tetNig1|chr16 (1896938-1897066) | |
| 448-573, gnl|xenTro1|scaffold_1170 (215378-215247) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.165235) | |
| nca (0.136874) |