Non-Coding RNA Search

Ss1.1-Mixc-0041,o14.5

Sequence:


               
               GAATTCATTTCAACTAAGGGTCTAGCCAAGCTGCTGCTGCTGCTGCCTCAGCCTCCCTGC
CCTCCTCTCCTCCTCCCTCAACCCCAGTTGATAAAGATCCTAAGATAAAAACTACACTCT
GCAAGAGGGAGGTCCTACTCTGCGTACACTTAGAGAAAGCCTCTGCTGCCCTCCCATCCC
TCCACTAGCTGCTGACCAGCCTGTCCCTCCCGGCCCATGGCCTTGCCTGGCTTGGCTGCA
GTGCACTTTGAAACAAAGTGTCTGTCCTTTGGCCCTGCCTCTGGTTTGCTCCCAGAAAAC
ACGACAGGCTTCCCCATGGCACTTGCAGGGCATCTGGGCTGGGGGCACTCTGTCTTAGCA
AACAGTGTGGGGTGAGGAGGCGAGGTGGCTGAAGGGGCTATCTTTGGTCTCCGGAGGAGG
TGAGAGTTCCTGAGACCACCCCTTCTTCCTGAGACGGCCTGTGGGATCCCTTGGGAAGCC
TTGGAAGGTGATGTGCTCTGTAGGTGACGTCTTCCTTCTGCCGGGATGAAGCAGAGGAGC
CCCGCGCAGGGGGAAAACCCCTGTCCTGCTATCTACCTTAAGAACCCCTCGTCAAAGTTG
AGGAGTGTCCGCAGGTGCTCAAGACTTTGGGTGGTCATGGGGGGTTGGATGGGTCTCTCT
CCAGGAGGAAGGGGATCACTTTTCCATGAGATGTTCCTCTGGGCCCTGTTCAGGTCCAGA
CCCTGGTCTTCCACTCACCCTTGATCATGGGCTTCCAAAGTGCCCAGGACAGGGATGCCT
TCAGAAGAGTTCTGAGTTGCAGCCCAGGGTTCTTGTCGGCTGTTTCTGCTCCTAGCCACA
ACTTGGAGGAGAGTTGCAGGTGGCGTGGGCAGGGAGCAGGCACAGTTCTGCTTTGCTTTT
GTCTTCCTAGGTGTAGCTCCTGTTTATAAAGAGCTTGTTCTTCATGTTTTGAGCACTTTA
TGAAGAATAAAAAATTAACATACTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTCATTTCAACTAAGGGTCTAGCCAAGCTGCTGCTGCTGCTGCCTCAGCCTCCCTGC
CCTCCTCTCCTCCTCCCTCAACCCCAGTTGATAAAGATCCTAAGATAAAAACTACACTCT
GCAAGAGGGAGGTCCTACTCTGCGTACACTTAGAGAAAGCCTCTGCTGCCCTCCCATCCC
TCCACTAGCTGCTGACCAGCCTGTCCCTCCCGGCCCATGGCCTTGCCTGGCTTGGCTGCA
GTGCACTTTGAAACAAAGTGTCTGTCCTTTGGCCCTGCCTCTGGTTTGCTCCCAGAAAAC
ACGACAGGCTTCCCCATGGCACTTGCAGGGCATCTGGGCTGGGGGCACTCTGTCTTAGCA
AACAGTGTGGGGTGAGGAGGCGAGGTGGCTGAAGGGGCTATCTTTGGTCTCCGGAGGAGG
TGAGAGTTCCTGAGACCACCCCTTCTTCCTGAGACGGCCTGTGGGATCCCTTGGGAAGCC
TTGGAAGGTGATGTGCTCTGTAGGTGACGTCTTCCTTCTGCCGGGATGAAGCAGAGGAGC
CCCGCGCAGGGGGAAAACCCCTGTCCTGCTATCTACCTTAAGAACCCCTCGTCAAAGTTG
AGGAGTGTCCGCAGGTGCTCAAGACTTTGGGTGGTCATGGGGGGTTGGATGGGTCTCTCT
CCAGGAGGAAGGGGATCACTTTTCCATGAGATGTTCCTCTGGGCCCTGTTCAGGTCCAGA
CCCTGGTCTTCCACTCACCCTTGATCATGGGCTTCCAAAGTGCCCAGGACAGGGATGCCT
TCAGAAGAGTTCTGAGTTGCAGCCCAGGGTTCTTGTCGGCTGTTTCTGCTCCTAGCCACA
ACTTGGAGGAGAGTTGCAGGTGGCGTGGGCAGGGAGCAGGCACAGTTCTGCTTTGCTTTT
GTCTTCCTAGGTGTAGCTCCTGTTTATAAAGAGCTTGTTCTTCATGTTTTGAGCACTTTA
TGAAGAATAAAAAATTAACATACTAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               204-878, gnl|bosTau2|chr11 (8764122-8763453)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               204-878, gnl|bosTau2|chr11 (8764122-8763453)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               cga (0.279096)
               

               
               ton (0.1755)
               

               
               hyp (0.142837)
               

               
               cly (0.120642)
               

               
               jca (0.11396)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               ton (0.1755)
               

               
               hyp (0.142837)
               

               
               cly (0.120642)
               

               
               jca (0.11396)

	cga (0.279096)
	ton (0.1755)
	hyp (0.142837)
	cly (0.120642)
	jca (0.11396)