Ss1.1-Mixc-0043,e21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCAGTCCCTACCGCCCGCGCACCCCCGAGTAGTGAGTGACCCCGAGGAGGGTCCGGAGA GTCACCGCGGCAGCGCCGGGGGGTGTTTAAACCATGTTAAGGAGGATTTTGCAGAGGACT CCTGGGAGAGTTGGCTCTCAAGGTTCTGATTTAGATTCATCAGCAGCTCCTATAAACACA GTGGATGTCAATAATGAAAGCTCCTCAGAGGGTTTCATATGTCCCCAGTGTATGAAATCT CTTGGATCTGCTGATGAACTTTTCAAACACTATGAGGCAGTTCATGATGCTGGTAATGAT TCAAGTCAGGGAGGAGAAGCACTTGCTCTGAAACGAGATGACATAACACTACTCAGACAA GAGGTCCAAGACCTACAGGCTTCACTTAAGGAAGAAAAATGGTACTCAGAAGAATTAAAG AAAGAATTAGAAAAATTTCAAGGACTGCAGCAGCAAGAGTTGAAACCTGATGGAGTAGTG GCTGATTCATCAGCAGAACTACAGTCTTTGGAACAGCAATTAGAAGAAGCCCAAACAGAA AATTTTAATATTAAGCAAATGAAAGACTTATTTGAACAGAAAGCAGCCCAACTTGCCACT GAAATTGCAGACATAAAGTCAAAGTATGATGAAGAAAAGAGTCTTCGAGAAGCTGCTGAA CAAAAAGTGACACATCTAACAGAAGAATTAAACAAAGAAGCAACTATAATTCAAGATCTA AAGACTGAACTGCTTCAGAGACCTGGTATAGAAGATGTTGCTGTGCTCAAGAAAGAACTG GTCCAAGTGCAAACTCTAATGGACAACATGACCTTGGAACGTGAGAGAGAATCTGAAAAA CTCAAAGATGAGTGCAAAAAGTTACAAGCAGAATATGTTAACTCAGAGGCCACGATAAGC CAGCTGAGGAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCAGTCCCTACCGCCCGCGCACCCCCGAGTAGTGAGTGACCCCGAGGAGGGTCCGGAGA GTCACCGCGGCAGCGCCGGGGGGTGTTTAAACCATGTTAAGGAGGATTTTGCAGAGGACT CCTGGGAGAGTTGGCTCTCAAGGTTCTGATTTAGATTCATCAGCAGCTCCTATAAACACA GTGGATGTCAATAATGAAAGCTCCTCAGAGGGTTTCATATGTCCCCAGTGTATGAAATCT CTTGGATCTGCTGATGAACTTTTCAAACACTATGAGGCAGTTCATGATGCTGGTAATGAT TCAAGTCAGGGAGGAGAAGCACTTGCTCTGAAACGAGATGACATAACACTACTCAGACAA GAGGTCCAAGACCTACAGGCTTCACTTAAGGAAGAAAAATGGTACTCAGAAGAATTAAAG AAAGAATTAGAAAAATTTCAAGGACTGCAGCAGCAAGAGTTGAAACCTGATGGAGTAGTG GCTGATTCATCAGCAGAACTACAGTCTTTGGAACAGCAATTAGAAGAAGCCCAAACAGAA AATTTTAATATTAAGCAAATGAAAGACTTATTTGAACAGAAAGCAGCCCAACTTGCCACT GAAATTGCAGACATAAAGTCAAAGTATGATGAAGAAAAGAGTCTTCGAGAAGCTGCTGAA CAAAAAGTGACACATCTAACAGAAGAATTAAACAAAGAAGCAACTATAATTCAAGATCTA AAGACTGAACTGCTTCAGAGACCTGGTATAGAAGATGTTGCTGTGCTCAAGAAAGAACTG GTCCAAGTGCAAACTCTAATGGACAACATGACCTTGGAACGTGAGAGAGAATCTGAAAAA CTCAAAGATGAGTGCAAAAAGTTACAAGCAGAATATGTTAACTCAGAGGCCACGATAAGC CAGCTGAGGAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 209-335, gnl|bosTau2|chr16 (34392945-34393071) | |
| 209-335, gnl|Hg17|chr12 (91761233-91761104) | |
| 209-335, gnl|Mm7|chr10 (95552043-95552172) | |
| 490-627, gnl|bosTau2|chr16 (34400032-34400172) | |
| 490-627, gnl|Hg17|chr12 (91749276-91749138) | |
| 490-627, gnl|Mm7|chr10 (95557365-95557503) | |
| 729-889, gnl|bosTau2|chr16 (34402303-34402463) | |
| 729-889, gnl|canFam2|chr15 (36228736-36228907) | |
| 729-889, gnl|danRer3|chr18 (10728091-10728253) | |
| 729-889, gnl|dasNov1|scaffold_57686 (6393-6219) | |
| 729-889, gnl|echTel1|scaffold_251860 (6546-6724) | |
| 729-889, gnl|fr1|chrUn (113404442-113404613) | |
| 729-889, gnl|galGal2|chr1 (41472742-41472913) | |
| 729-889, gnl|hg17|chr12 (91747349-91747523) | |
| 729-889, gnl|Hg17|chr12 (91747514-91747354) | |
| 729-889, gnl|mm7|chr10 (95559587-95559414) | |
| 729-889, gnl|Mm7|chr10 (95559420-95559580) | |
| 729-889, gnl|monDom2|scaffold_34 (23539849-23539671) | |
| 729-889, gnl|panTro1|chr10 (93920803-93920977) | |
| 729-889, gnl|rheMac2|chr11 (94060213-94060387) | |
| 729-889, gnl|rn3|chr7 (33350060-33349887) | |
| 729-889, gnl|tetNig1|chr13 (4712424-4712253) | |
| 729-889, gnl|xenTro1|scaffold_109 (1483607-1483779) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 209-335, gnl|bosTau2|chr16 (34392945-34393071) | |
| 209-335, gnl|Hg17|chr12 (91761233-91761104) | |
| 209-335, gnl|Mm7|chr10 (95552043-95552172) | |
| 490-627, gnl|bosTau2|chr16 (34400032-34400172) | |
| 490-627, gnl|Hg17|chr12 (91749276-91749138) | |
| 490-627, gnl|Mm7|chr10 (95557365-95557503) | |
| 729-889, gnl|bosTau2|chr16 (34402303-34402463) | |
| 729-889, gnl|canFam2|chr15 (36228736-36228907) | |
| 729-889, gnl|danRer3|chr18 (10728091-10728253) | |
| 729-889, gnl|dasNov1|scaffold_57686 (6393-6219) | |
| 729-889, gnl|echTel1|scaffold_251860 (6546-6724) | |
| 729-889, gnl|fr1|chrUn (113404442-113404613) | |
| 729-889, gnl|galGal2|chr1 (41472742-41472913) | |
| 729-889, gnl|hg17|chr12 (91747349-91747523) | |
| 729-889, gnl|Hg17|chr12 (91747514-91747354) | |
| 729-889, gnl|mm7|chr10 (95559587-95559414) | |
| 729-889, gnl|Mm7|chr10 (95559420-95559580) | |
| 729-889, gnl|monDom2|scaffold_34 (23539849-23539671) | |
| 729-889, gnl|panTro1|chr10 (93920803-93920977) | |
| 729-889, gnl|rheMac2|chr11 (94060213-94060387) | |
| 729-889, gnl|rn3|chr7 (33350060-33349887) | |
| 729-889, gnl|tetNig1|chr13 (4712424-4712253) | |
| 729-889, gnl|xenTro1|scaffold_109 (1483607-1483779) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |