Non-Coding RNA Search

Ss1.1-Mixc-0043,i24.5

Sequence:


               
               GTCCTCACCCGCCCTGGGGACCTGCAGACTCAGGGACACGTAATGACACCTGCCCTGTCC
TCCCCTGCCCTGGGGACCTGGGGACCCACGGACACATCCTGACACCTGCAGCAGCACCTT
CTGTTGGAGACCTGAAAGCACTAGGAAGCACTCGCCCATCCTGAGCCTTTCCTGGAGAGG
GAGAAGTGCTTGCTGCCCGACAGACCAGCCTCCCCTAAAGAGAAATGCTTCTTCCAGAGG
ATTCTGGGAACATCCAGAAGCTTCCAGACCAGCCACTGCCAGGAGAGGCCCTTCCCACCT
AGAAAGGAAATTGGTCTTTTCACTGAAATCAGGGATTCTCAATCTTGGCACTGCAGACAC
TTGGGGGGGAGAAACTCCTTTGGGGGTAGGGGGCTGTCTTGTGTATTATGGGATGTTTAG
CAACATCCCCAGCCTCTACCCACCAGATGCCAGGAGCCCTTCCCAGCTGTGACAACCAAA
AATGTCTCCAGACATGACCCATTGCCTCCCTCGGGGGCATCGCCCGCCGACCTGAGTCCC
AGCGTGCCCGCTCCAGCAAGTCTGGGGTGGAGAGTTCAGCGTTTCCATGAATTCCTGGTG
CACAGTGGGCAGCAGGTTCCAGAAGCCCCTGCCTCAGGGATTTTCTGGACCATTTGTGGT
CTGAATTTTTATTTCCTAAAGCCTAGATTAGTCTCTTATTCAGGAAAGAGTGGCCCCTTA
ACAAGTCATCCATGATAGTTACTTCGTTAAAGATACCAACCCTCACAGCCTCTCAGGTCC
TGACTGGCGGCAGGTGGATTTCCAAAGTTAACCAATAGCTCCCTCTTGTGGCTAAATAAA
ATATTTCCTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCTCACCCGCCCTGGGGACCTGCAGACTCAGGGACACGTAATGACACCTGCCCTGTCC
TCCCCTGCCCTGGGGACCTGGGGACCCACGGACACATCCTGACACCTGCAGCAGCACCTT
CTGTTGGAGACCTGAAAGCACTAGGAAGCACTCGCCCATCCTGAGCCTTTCCTGGAGAGG
GAGAAGTGCTTGCTGCCCGACAGACCAGCCTCCCCTAAAGAGAAATGCTTCTTCCAGAGG
ATTCTGGGAACATCCAGAAGCTTCCAGACCAGCCACTGCCAGGAGAGGCCCTTCCCACCT
AGAAAGGAAATTGGTCTTTTCACTGAAATCAGGGATTCTCAATCTTGGCACTGCAGACAC
TTGGGGGGGAGAAACTCCTTTGGGGGTAGGGGGCTGTCTTGTGTATTATGGGATGTTTAG
CAACATCCCCAGCCTCTACCCACCAGATGCCAGGAGCCCTTCCCAGCTGTGACAACCAAA
AATGTCTCCAGACATGACCCATTGCCTCCCTCGGGGGCATCGCCCGCCGACCTGAGTCCC
AGCGTGCCCGCTCCAGCAAGTCTGGGGTGGAGAGTTCAGCGTTTCCATGAATTCCTGGTG
CACAGTGGGCAGCAGGTTCCAGAAGCCCCTGCCTCAGGGATTTTCTGGACCATTTGTGGT
CTGAATTTTTATTTCCTAAAGCCTAGATTAGTCTCTTATTCAGGAAAGAGTGGCCCCTTA
ACAAGTCATCCATGATAGTTACTTCGTTAAAGATACCAACCCTCACAGCCTCTCAGGTCC
TGACTGGCGGCAGGTGGATTTCCAAAGTTAACCAATAGCTCCCTCTTGTGGCTAAATAAA
ATATTTCCTTAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               143-460, gnl|bosTau2|chr6 (60585622-60585311)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               143-460, gnl|bosTau2|chr6 (60585622-60585311)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               fhi (0.169578)
               

               
               nje (0.16592)
               

               
               cag (0.151194)
               

               
               ldo (0.0970026)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               nje (0.16592)
               

               
               cag (0.151194)
               

               
               ldo (0.0970026)