Non-Coding RNA Search

Ss1.1-Mixc-0043,m21.5

Sequence:


               
               CTGAATGCTTGCCCCCTGAAGCAGCAACTTCCCACTTGTTACAGTAGTCTTCTTGCATAG
CCCTTCCAGCCCCACTAAGCAGGACTCATGGCTGGGGTGCCTGCAGACAGCTGACGGAAG
GGACCCACTGGGGGAAGGCATGAAGACTGATCTCCGAGCGCTCCTCTCAGCCTCCATGGA
ATGTTCTGGAGTGACAGGGGCAGCATCTGTGAGGACCCTGAGAGAGTGAGTTGTCTGTGT
GAAAGGAGAGTCCTTGGGATAGTCCCGCCTCCCTTCCCGCCTGCCCCCCAACTCACCTCG
TACCCTCTATCAAATGCTGACACTCCTCTAGTGGACACACGCTTGTGAAACAGAAAGTGT
TCAGAAATGGAGAGCTGAGATTTACCCCTCTGATAATAGAATCTTTCATTTCATTTGTGT
TTTATACGTCACAGGAGGAAGCAGATAATTTGGTGACTGATGTGGGCTTCTATTGCAGTC
AAAGCTTCCCTTTCGAGTTCTCTAACTCGCTCACTAATGCCTTGTGTGTGTGTGTGTGTG
CGTGTGTTACTAACCTTTTATCCTATGCCTTTAGGTGAGAAGGAACAACAGACCCTTGGG
GATGGCTGTTTGCTGGCTGTGAAGGTCAAAAGAAAGAAGAGTCTGCACCTTTGCCCTTGG
TTGTGCCCCAGGCCTCCTGGTGGTCACGGGTAGGTGCAGAAAGACTGATGGGGTCTGTTT
GCACAGTCTTAGGATATTCAGTCTCAGTGTCCTATCAGTATTCATTGTTCTTGGATACTG
CACAACTGCTCAGACTGAATAAAACATCCGTGGTGCTGTCAACCTGATTTCTTGACTCTC
AAATGATTTTTGTATTTCCAGTACCAATTTGTGTGTTACGAATTTCTGATTTCTCCAACA
GCATATGCCACTATATAAATTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAATGCTTGCCCCCTGAAGCAGCAACTTCCCACTTGTTACAGTAGTCTTCTTGCATAG
CCCTTCCAGCCCCACTAAGCAGGACTCATGGCTGGGGTGCCTGCAGACAGCTGACGGAAG
GGACCCACTGGGGGAAGGCATGAAGACTGATCTCCGAGCGCTCCTCTCAGCCTCCATGGA
ATGTTCTGGAGTGACAGGGGCAGCATCTGTGAGGACCCTGAGAGAGTGAGTTGTCTGTGT
GAAAGGAGAGTCCTTGGGATAGTCCCGCCTCCCTTCCCGCCTGCCCCCCAACTCACCTCG
TACCCTCTATCAAATGCTGACACTCCTCTAGTGGACACACGCTTGTGAAACAGAAAGTGT
TCAGAAATGGAGAGCTGAGATTTACCCCTCTGATAATAGAATCTTTCATTTCATTTGTGT
TTTATACGTCACAGGAGGAAGCAGATAATTTGGTGACTGATGTGGGCTTCTATTGCAGTC
AAAGCTTCCCTTTCGAGTTCTCTAACTCGCTCACTAATGCCTTGTGTGTGTGTGTGTGTG
CGTGTGTTACTAACCTTTTATCCTATGCCTTTAGGTGAGAAGGAACAACAGACCCTTGGG
GATGGCTGTTTGCTGGCTGTGAAGGTCAAAAGAAAGAAGAGTCTGCACCTTTGCCCTTGG
TTGTGCCCCAGGCCTCCTGGTGGTCACGGGTAGGTGCAGAAAGACTGATGGGGTCTGTTT
GCACAGTCTTAGGATATTCAGTCTCAGTGTCCTATCAGTATTCATTGTTCTTGGATACTG
CACAACTGCTCAGACTGAATAAAACATCCGTGGTGCTGTCAACCTGATTTCTTGACTCTC
AAATGATTTTTGTATTTCCAGTACCAATTTGTGTGTTACGAATTTCTGATTTCTCCAACA
GCATATGCCACTATATAAATTTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-924, gnl|bosTau2|chr6 (50818531-50817638)
               

               
               1-924, gnl|Hg17|chr4 (79821657-79822575)
               

               
               1-924, gnl|Mm7|chr5 (95997134-95998050)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-924, gnl|bosTau2|chr6 (50818531-50817638)
               

               
               1-924, gnl|Hg17|chr4 (79821657-79822575)
               

               
               1-924, gnl|Mm7|chr5 (95997134-95998050)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               ste (0.135208)
               

               
               eru (0.120048)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               ste (0.135208)
               

               
               eru (0.120048)

	1-924, gnl\|bosTau2\|chr6 (50818531-50817638)
	1-924, gnl\|Hg17\|chr4 (79821657-79822575)
	1-924, gnl\|Mm7\|chr5 (95997134-95998050)