Ss1.1-Mixc-0043,n07.5
|
GGGTCTCACCTTACCCGGATCCCCTACCCAGCTGGGACCCTCCCCAACCCCCTTCTTCCT
CACCCTCTGCACGAGAACGAAGTTCTTCGTCACCAGCTCTTTGCTGCTCCTTACCGGGAC
CTGCCAGCCTCCCTCTCTGCCCCAATGTCAGCAGCTCACCAGCTGCAGGCCATGCACGCG
CAGTCCGCTGAGCTGCAGCGCTTGGCACTGGAGCAGCAGCAGTGGCTGCACGCCCATCAC
CCACTGCACAGTGTGCCGCTGCCTGCCCAGGAGGATTACTACAGTCACCTGAAGAAGGAA
AGCGACAAGCCGCTGTAGAACCTGCGACCAAGAGAGCACCCGCGGCCCCTGCATCTGGAC
TCTGGAGGCCTCCCTCCCCGCCTGCCACCCAGCCGAGAGGGGGTGCTGCTCAGCCCCAGG
GCCTGGGGCTTCTGGGCTAGAGGGAGGAAGGAAGGGACAGATGGAAGGCCAAGGCTCCTG
TGATGTGCGTGCGGAGGTGGGGAGGTGGAGGGGGTGGGGGCAGAAAGCGCACAGTTTCTT
GGACCGCTCCCTCTCCCTTGTCCCCCGGCTTTCCCCCCCCTCCCCGCCCCCGCCCCCGTC
CCCGCGGCCACCGCCCCTCCCCCACCCCGTTGGTGTGATTATTTCATCTGTTAGATGTGG
CTGTTTTGCGTAGCATCGTGTGCCGCCCTGCCCCTCCCCAGTCCCCGTGTGCGCGCTCCC
ACTGCGATGTATGCCCCTGCCCCTCCCCCACATTAATAATTTATATATATAAATATCTAT
ATGATGCTCTTTAAAAAATATCCCAAACAAAACCAACCAAACAAAAAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGTCTCACCTTACCCGGATCCCCTACCCAGCTGGGACCCTCCCCAACCCCCTTCTTCCT
CACCCTCTGCACGAGAACGAAGTTCTTCGTCACCAGCTCTTTGCTGCTCCTTACCGGGAC
CTGCCAGCCTCCCTCTCTGCCCCAATGTCAGCAGCTCACCAGCTGCAGGCCATGCACGCG
CAGTCCGCTGAGCTGCAGCGCTTGGCACTGGAGCAGCAGCAGTGGCTGCACGCCCATCAC
CCACTGCACAGTGTGCCGCTGCCTGCCCAGGAGGATTACTACAGTCACCTGAAGAAGGAA
AGCGACAAGCCGCTGTAGAACCTGCGACCAAGAGAGCACCCGCGGCCCCTGCATCTGGAC
TCTGGAGGCCTCCCTCCCCGCCTGCCACCCAGCCGAGAGGGGGTGCTGCTCAGCCCCAGG
GCCTGGGGCTTCTGGGCTAGAGGGAGGAAGGAAGGGACAGATGGAAGGCCAAGGCTCCTG
TGATGTGCGTGCGGAGGTGGGGAGGTGGAGGGGGTGGGGGCAGAAAGCGCACAGTTTCTT
GGACCGCTCCCTCTCCCTTGTCCCCCGGCTTTCCCCCCCCTCCCCGCCCCCGCCCCCGTC
CCCGCGGCCACCGCCCCTCCCCCACCCCGTTGGTGTGATTATTTCATCTGTTAGATGTGG
CTGTTTTGCGTAGCATCGTGTGCCGCCCTGCCCCTCCCCAGTCCCCGTGTGCGCGCTCCC
ACTGCGATGTATGCCCCTGCCCCTCCCCCACATTAATAATTTATATATATAAATATCTAT
ATGATGCTCTTTAAAAAATATCCCAAACAAAACCAACCAAACAAAAAC
|
|
gi|61884865|ref|XP_590762.1| |
Protein identifier
|
gi|61884865|ref|XP_590762.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
103-289, gnl|bosTau2|chr5 (60333337-60333151) |
|
103-289, gnl|canFam2|chr27 (41133647-41133442) |
|
103-289, gnl|danRer3|chr23 (31500417-31500618) |
|
103-289, gnl|dasNov1|scaffold_64720 (3031-2851) |
|
103-289, gnl|echTel1|scaffold_196092 (1395-1202) |
|
103-289, gnl|fr1|chrUn (74974996-74975158) |
|
103-289, gnl|galGal2|chr1 (71412086-71412289) |
|
103-289, gnl|hg17|chr12 (6920776-6920981) |
|
103-289, gnl|Hg17|chr12 (6920797-6920983) |
|
103-289, gnl|loxAfr1|scaffold_60301 (6141-5945) |
|
103-289, gnl|mm7|chr6 (124768662-124768458) |
|
103-289, gnl|Mm7|chr6 (124768640-124768454) |
|
103-289, gnl|monDom2|scaffold_644 (14815-15019) |
|
103-289, gnl|oryCun1|scaffold_114575 (3391-3596) |
|
103-289, gnl|panTro1|chr10 (7458696-7458901) |
|
103-289, gnl|rheMac2|chr11 (7123042-7123247) |
|
103-289, gnl|rn3|chr4 (161118169-161117968) |
|
103-289, gnl|xenTro1|scaffold_811 (410209-409982) |
| |
|
114-284, gnl|bosTau2|chr16 (30479794-30479627) |
|
114-284, gnl|Hg17|chr1 (8349912-8349745) |
|
114-284, gnl|Mm7|chr4 (149608580-149608747) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
103-289, gnl|bosTau2|chr5 (60333337-60333151) |
|
103-289, gnl|canFam2|chr27 (41133647-41133442) |
|
103-289, gnl|danRer3|chr23 (31500417-31500618) |
|
103-289, gnl|dasNov1|scaffold_64720 (3031-2851) |
|
103-289, gnl|echTel1|scaffold_196092 (1395-1202) |
|
103-289, gnl|fr1|chrUn (74974996-74975158) |
|
103-289, gnl|galGal2|chr1 (71412086-71412289) |
|
103-289, gnl|hg17|chr12 (6920776-6920981) |
|
103-289, gnl|Hg17|chr12 (6920797-6920983) |
|
103-289, gnl|loxAfr1|scaffold_60301 (6141-5945) |
|
103-289, gnl|mm7|chr6 (124768662-124768458) |
|
103-289, gnl|Mm7|chr6 (124768640-124768454) |
|
103-289, gnl|monDom2|scaffold_644 (14815-15019) |
|
103-289, gnl|oryCun1|scaffold_114575 (3391-3596) |
|
103-289, gnl|panTro1|chr10 (7458696-7458901) |
|
103-289, gnl|rheMac2|chr11 (7123042-7123247) |
|
103-289, gnl|rn3|chr4 (161118169-161117968) |
|
103-289, gnl|xenTro1|scaffold_811 (410209-409982) |
| |
|
114-284, gnl|bosTau2|chr16 (30479794-30479627) |
|
114-284, gnl|Hg17|chr1 (8349912-8349745) |
|
114-284, gnl|Mm7|chr4 (149608580-149608747) |
|
hyp (0.285673) |
|
fce (0.271592) |
|
ese (0.253004) |
|
eye (0.170503) |
|
lnt (0.142308) |
|
cov (0.132153) |
|
hyp (0.285673) |
|
fce (0.271592) |
|
ese (0.253004) |
|
eye (0.170503) |
|
lnt (0.142308) |
|
cov (0.132153) |
