Non-Coding RNA Search

Ss1.1-Mixc-0044,f05.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTAATGG------------CATATGGAAGTTCCCAAGCCAGGG
ATCGAATCCGAGCTGCAGCTGTTGCAACGCTGGATCTTTAAACCCGCTGCACCTCCCAGG
GATCAAACCCACACCTCTGCAGCAACCTGAGCTGTTGCAGTAGGATACATAATCCACTGT
GCCATAGCGGGAACTCCTGGATGCAAATCTTGACTTTTCCTCCTACTAGAGTGTGTCCTT
GAGCAAGATACTTAATCTTTCTGAGCCTTAGTTTTCTGTAAAATGGAAATAATAATATAG
TATTTACAGTTATTGTGAGGATTAAATGAGTTACTGTATTTAAAATCTTTAGAACAGTGC
TTGGAACGCAGTCAGCACCGTATAGGCACGTGCTATTATTATTATCATACCCTCTGCCCA
TTATTGTTTACCCTAAAATCTACAACAGACTCCCTGCTGGCCTCCAGCCCACTCTTGTCT
CCTCTAAACCAGGTACCACACAGCCACCAAGGGCTTCATTCCAATAGGCTATTCTGACCG
TCCAGACCCCGCTGGGGACCCTCATTGGATCTTCACTGCCCATTCTAAAAAAATACGATT
CCAGTAAGGTCTATAAGGGCCCTCAGAACCTGGACCTGGCTTATAGGGTTTAGCCGCTTC
ATTCTGCCCCTTTTCCTCATATTCTGTGCTCCCCGGCTTCCTTTTATCAGTTGCTTTAAT
CTGATCATTACTTGCCTCANGGCCTTTGCATATGCTGTTCCCTTTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTAATGG------------CATATGGAAGTTCCCAAGCCAGGG
ATCGAATCCGAGCTGCAGCTGTTGCAACGCTGGATCTTTAAACCCGCTGCACCTCCCAGG
GATCAAACCCACACCTCTGCAGCAACCTGAGCTGTTGCAGTAGGATACATAATCCACTGT
GCCATAGCGGGAACTCCTGGATGCAAATCTTGACTTTTCCTCCTACTAGAGTGTGTCCTT
GAGCAAGATACTTAATCTTTCTGAGCCTTAGTTTTCTGTAAAATGGAAATAATAATATAG
TATTTACAGTTATTGTGAGGATTAAATGAGTTACTGTATTTAAAATCTTTAGAACAGTGC
TTGGAACGCAGTCAGCACCGTATAGGCACGTGCTATTATTATTATCATACCCTCTGCCCA
TTATTGTTTACCCTAAAATCTACAACAGACTCCCTGCTGGCCTCCAGCCCACTCTTGTCT
CCTCTAAACCAGGTACCACACAGCCACCAAGGGCTTCATTCCAATAGGCTATTCTGACCG
TCCAGACCCCGCTGGGGACCCTCATTGGATCTTCACTGCCCATTCTAAAAAAATACGATT
CCAGTAAGGTCTATAAGGGCCCTCAGAACCTGGACCTGGCTTATAGGGTTTAGCCGCTTC
ATTCTGCCCCTTTTCCTCATATTCTGTGCTCCCCGGCTTCCTTTTATCAGTTGCTTTAAT
CTGATCATTACTTGCCTCANGGCCTTTGCATATGCTGTTCCCTTTCTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               185-391, gnl|bosTau2|chr19 (13815738-13815944)
               

               
               185-391, gnl|Hg17|chr17 (24252900-24253082)
               

               
               185-391, gnl|Mm7|chr11 (78115461-78115140)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               185-391, gnl|bosTau2|chr19 (13815738-13815944)
               

               
               185-391, gnl|Hg17|chr17 (24252900-24253082)
               

               
               185-391, gnl|Mm7|chr11 (78115461-78115140)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	185-391, gnl\|bosTau2\|chr19 (13815738-13815944)
	185-391, gnl\|Hg17\|chr17 (24252900-24253082)
	185-391, gnl\|Mm7\|chr11 (78115461-78115140)