Ss1.1-Mixc-0044,o14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGAGCGCGGTCTCTCGAGCTCATGGCGGGGCTGCTGCTCGCGCGCGGTGGGGTATTGC GGCCTCCGGGCTGCAAACTTGGGTGTCTCTTTCCTCACGGACTCGGGGTTTACAGCCCGG GGGAGGGCACTGCGAGGGTCCTGCTGGCGCGACTCTGCGCTCGGCCAGTGGAGACATGGC GGCCCTCGGGGCTCGCTAGCCGCTGGCTGGGAAGCCGGCCCCTCAGCACGGAGAGACCGC CACCGCCCGGGTCGTCGGGTCCGGAGCTGAAGGGCAGCAGAGACCCCACGCGCCCCTCGA AGCCCGGGCCTGTTTCCTGGAAGTCTTTAGCCATCACCTTTGCTATTGGAGGAGCTTTAT TGGCTGGAATGAAGTACTTAAAGAAAGAAAAGACAGAGAAGCTGGAGAAGGAACGGCAGC GAAGTATTGGAAAACCTTTACTTGGGGGCCCGTTTTCCCTCACGACTCACACCGGAGAGC CCAAAACTGATAAGGACTACCTGGGTCAGTGGGTATTGATTTATTTTGGTTTCACTCACT GCCCTGATATCTGTCCAGAAGAACTAGAGAAGATGATTCAAGTCGTGGATGAAATAGATA GTATTCCAACGCTGCCAAATTTAACCCCGCTTTTCATCACCATTGACCCAGAGAGGGACA CAGAAGAAGCCATCGCAAATTATGTGAAAGAATTTTCTCCCAAGCTGATTGGCTTGACTG GCACAAAAGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGAGCGCGGTCTCTCGAGCTCATGGCGGGGCTGCTGCTCGCGCGCGGTGGGGTATTGC GGCCTCCGGGCTGCAAACTTGGGTGTCTCTTTCCTCACGGACTCGGGGTTTACAGCCCGG GGGAGGGCACTGCGAGGGTCCTGCTGGCGCGACTCTGCGCTCGGCCAGTGGAGACATGGC GGCCCTCGGGGCTCGCTAGCCGCTGGCTGGGAAGCCGGCCCCTCAGCACGGAGAGACCGC CACCGCCCGGGTCGTCGGGTCCGGAGCTGAAGGGCAGCAGAGACCCCACGCGCCCCTCGA AGCCCGGGCCTGTTTCCTGGAAGTCTTTAGCCATCACCTTTGCTATTGGAGGAGCTTTAT TGGCTGGAATGAAGTACTTAAAGAAAGAAAAGACAGAGAAGCTGGAGAAGGAACGGCAGC GAAGTATTGGAAAACCTTTACTTGGGGGCCCGTTTTCCCTCACGACTCACACCGGAGAGC CCAAAACTGATAAGGACTACCTGGGTCAGTGGGTATTGATTTATTTTGGTTTCACTCACT GCCCTGATATCTGTCCAGAAGAACTAGAGAAGATGATTCAAGTCGTGGATGAAATAGATA GTATTCCAACGCTGCCAAATTTAACCCCGCTTTTCATCACCATTGACCCAGAGAGGGACA CAGAAGAAGCCATCGCAAATTATGTGAAAGAATTTTCTCCCAAGCTGATTGGCTTGACTG GCACAAAAGAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 1-308, gnl|bosTau2|chr19 (2627795-2627487) | |
| 1-308, gnl|canFam2|chr5 (37964971-37965158) | |
| 1-308, gnl|dasNov1|scaffold_11286 (4295-4482) | |
| 1-308, gnl|echTel1|scaffold_321255 (46016-45835) | |
| 1-308, gnl|hg17|chr12 (46840925-46841115) | |
| 1-308, gnl|Hg17|chr17 (10541573-10541277) | |
| 1-308, gnl|loxAfr1|scaffold_28949 (37504-37679) | |
| 1-308, gnl|monDom2|scaffold_74 (6787181-6787011) | |
| 1-308, gnl|oryCun1|scaffold_94274 (1399-1242) | |
| 1-308, gnl|panTro1|chr10 (47910567-47910757) | |
| 1-308, gnl|rheMac2|chr11 (45238994-45239184) | |
| 397-600, gnl|bosTau2|chr19 (2623270-2623068) | |
| 397-600, gnl|canFam2|chr5 (37960825-37961052) | |
| 397-600, gnl|canFam2|chr5 (37960840-37961032) | |
| 397-600, gnl|danRer3|chr19 (59411567-59411789) | |
| 397-600, gnl|danRer3|chr19 (59411576-59411763) | |
| 397-600, gnl|dasNov1|scaffold_11286 (4009-4197) | |
| 397-600, gnl|dasNov1|scaffold_199 (143638-143874) | |
| 397-600, gnl|echTel1|scaffold_321255 (47843-47616) | |
| 397-600, gnl|echTel1|scaffold_321255 (47824-47632) | |
| 397-600, gnl|fr1|chrUn (127053483-127053272) | |
| 397-600, gnl|fr1|chrUn (127053466-127053196) | |
| 397-600, gnl|galGal2|chrUn (127440351-127440138) | |
| 397-600, gnl|hg17|chr12 (46840639-46840828) | |
| 397-600, gnl|hg17|chr17 (10536793-10537026) | |
| 397-600, gnl|Hg17|chr17 (10537005-10536803) | |
| 397-600, gnl|loxAfr1|scaffold_28949 (31918-32142) | |
| 397-600, gnl|loxAfr1|scaffold_28949 (31937-32129) | |
| 397-600, gnl|mm7|chr11 (67137509-67137285) | |
| 397-600, gnl|mm7|chr11 (67137490-67137298) | |
| 397-600, gnl|Mm7|chr11 (67137295-67137497) | |
| 397-600, gnl|monDom2|scaffold_18 (2708541-2708322) | |
| 397-600, gnl|monDom2|scaffold_74 (6787473-6787281) | |
| 397-600, gnl|oryCun1|scaffold_94274 (3708-3476) | |
| 397-600, gnl|oryCun1|scaffold_94274 (3689-3497) | |
| 397-600, gnl|panTro1|chr10 (47910292-47910470) | |
| 397-600, gnl|panTro1|chr19_random (27882637-27882406) | |
| 397-600, gnl|rheMac2|chr11 (45238711-45238899) | |
| 397-600, gnl|rheMac2|chr16 (10443815-10444046) | |
| 397-600, gnl|rn3|chr10 (53769004-53768780) | |
| 397-600, gnl|rn3|chr10 (53768985-53768793) | |
| 397-600, gnl|tetNig1|chrUn_random (96878509-96878296) | |
| 397-600, gnl|tetNig1|chrUn_random (96878490-96878219) | |
| 397-600, gnl|xenTro1|scaffold_760 (195050-194822) | |
| 397-600, gnl|xenTro1|scaffold_80 (2324840-2325040) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-308, gnl|bosTau2|chr19 (2627795-2627487) | |
| 1-308, gnl|canFam2|chr5 (37964971-37965158) | |
| 1-308, gnl|dasNov1|scaffold_11286 (4295-4482) | |
| 1-308, gnl|echTel1|scaffold_321255 (46016-45835) | |
| 1-308, gnl|hg17|chr12 (46840925-46841115) | |
| 1-308, gnl|Hg17|chr17 (10541573-10541277) | |
| 1-308, gnl|loxAfr1|scaffold_28949 (37504-37679) | |
| 1-308, gnl|monDom2|scaffold_74 (6787181-6787011) | |
| 1-308, gnl|oryCun1|scaffold_94274 (1399-1242) | |
| 1-308, gnl|panTro1|chr10 (47910567-47910757) | |
| 1-308, gnl|rheMac2|chr11 (45238994-45239184) | |
| 397-600, gnl|bosTau2|chr19 (2623270-2623068) | |
| 397-600, gnl|canFam2|chr5 (37960825-37961052) | |
| 397-600, gnl|canFam2|chr5 (37960840-37961032) | |
| 397-600, gnl|danRer3|chr19 (59411567-59411789) | |
| 397-600, gnl|danRer3|chr19 (59411576-59411763) | |
| 397-600, gnl|dasNov1|scaffold_11286 (4009-4197) | |
| 397-600, gnl|dasNov1|scaffold_199 (143638-143874) | |
| 397-600, gnl|echTel1|scaffold_321255 (47843-47616) | |
| 397-600, gnl|echTel1|scaffold_321255 (47824-47632) | |
| 397-600, gnl|fr1|chrUn (127053483-127053272) | |
| 397-600, gnl|fr1|chrUn (127053466-127053196) | |
| 397-600, gnl|galGal2|chrUn (127440351-127440138) | |
| 397-600, gnl|hg17|chr12 (46840639-46840828) | |
| 397-600, gnl|hg17|chr17 (10536793-10537026) | |
| 397-600, gnl|Hg17|chr17 (10537005-10536803) | |
| 397-600, gnl|loxAfr1|scaffold_28949 (31918-32142) | |
| 397-600, gnl|loxAfr1|scaffold_28949 (31937-32129) | |
| 397-600, gnl|mm7|chr11 (67137509-67137285) | |
| 397-600, gnl|mm7|chr11 (67137490-67137298) | |
| 397-600, gnl|Mm7|chr11 (67137295-67137497) | |
| 397-600, gnl|monDom2|scaffold_18 (2708541-2708322) | |
| 397-600, gnl|monDom2|scaffold_74 (6787473-6787281) | |
| 397-600, gnl|oryCun1|scaffold_94274 (3708-3476) | |
| 397-600, gnl|oryCun1|scaffold_94274 (3689-3497) | |
| 397-600, gnl|panTro1|chr10 (47910292-47910470) | |
| 397-600, gnl|panTro1|chr19_random (27882637-27882406) | |
| 397-600, gnl|rheMac2|chr11 (45238711-45238899) | |
| 397-600, gnl|rheMac2|chr16 (10443815-10444046) | |
| 397-600, gnl|rn3|chr10 (53769004-53768780) | |
| 397-600, gnl|rn3|chr10 (53768985-53768793) | |
| 397-600, gnl|tetNig1|chrUn_random (96878509-96878296) | |
| 397-600, gnl|tetNig1|chrUn_random (96878490-96878219) | |
| 397-600, gnl|xenTro1|scaffold_760 (195050-194822) | |
| 397-600, gnl|xenTro1|scaffold_80 (2324840-2325040) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) |