Non-Coding RNA Search

Ss1.1-Mixg-0001a12.5

Sequence:


               
               AGCGGGGATACACGGTGTTTAAGATAGAAGTGCTAATGAACGGAAGAAAACATTTGTCGA
AAAGAGGTACAGCGAATTCCATGCCCTGCACAAAGCTCAAGAAATGTATTAAAACTCCAG
AAATCCCTTCTAAACATGTTCGCAATGGGGTCCCTAAAGTCTTGGAACAACGTCGACAAG
GTTTGGAAACATATCTACAGGCTGTCATTCTAGAAAATGAAGAACTCCCCAAACTGTTTC
TTGATTTCCTAAACGTGCGACATTTGCCCTCTCTACCAAAGGCAGAGAGTTGTGGGTCTT
TTGATGAGACAGAATCTGAAGAGTCAAGCAAACTGTCCCACCAGCCGGTGCTGCTTTTCC
TCAGGGATCCATACGTCTTGCCTGCAGCCAGCGATTTTCCGAATGTGGTTATTGAAGGTG
TTCTCCATGGGATATTTTACCCTCACCTCCAGCCCAGGTAGAAATCCTCCACAGCTAAAG
GAAGCTGAAGCAAGTTTCGAAGTCATAGTCAAGGAAATCGATACCTACCAAATTAACCTA
AACTCAATGACATAACAGCTCTCACTAGTGGTAAAATTCACAGACCCAGCTTAATTCAGG
GCAGGGACATTTCCATTAGAATGGTGCTTTTAAAAATAGAACTGAACCAGGGGTTGCTGA
GGTTAAGGTCAAGTGTTTAAGAAGTAGAACGTGGCTGCCAATTTAGAAACGCAGGAAAAA
AAGGCTAAAGGCGATCGCTGGGAACTCCGAGTGGAGCAGAACCGTTACTCTCAGCTTCGG
GCACACCGTTTGCTAATTGAAAACCTTATCCTGAATCAGCAGGAGACTGATNCACTTTGG
TGGCTTTCTCGTTCTGATTGTATGACACACTAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGGGGATACACGGTGTTTAAGATAGAAGTGCTAATGAACGGAAGAAAACATTTGTCGA
AAAGAGGTACAGCGAATTCCATGCCCTGCACAAAGCTCAAGAAATGTATTAAAACTCCAG
AAATCCCTTCTAAACATGTTCGCAATGGGGTCCCTAAAGTCTTGGAACAACGTCGACAAG
GTTTGGAAACATATCTACAGGCTGTCATTCTAGAAAATGAAGAACTCCCCAAACTGTTTC
TTGATTTCCTAAACGTGCGACATTTGCCCTCTCTACCAAAGGCAGAGAGTTGTGGGTCTT
TTGATGAGACAGAATCTGAAGAGTCAAGCAAACTGTCCCACCAGCCGGTGCTGCTTTTCC
TCAGGGATCCATACGTCTTGCCTGCAGCCAGCGATTTTCCGAATGTGGTTATTGAAGGTG
TTCTCCATGGGATATTTTACCCTCACCTCCAGCCCAGGTAGAAATCCTCCACAGCTAAAG
GAAGCTGAAGCAAGTTTCGAAGTCATAGTCAAGGAAATCGATACCTACCAAATTAACCTA
AACTCAATGACATAACAGCTCTCACTAGTGGTAAAATTCACAGACCCAGCTTAATTCAGG
GCAGGGACATTTCCATTAGAATGGTGCTTTTAAAAATAGAACTGAACCAGGGGTTGCTGA
GGTTAAGGTCAAGTGTTTAAGAAGTAGAACGTGGCTGCCAATTTAGAAACGCAGGAAAAA
AAGGCTAAAGGCGATCGCTGGGAACTCCGAGTGGAGCAGAACCGTTACTCTCAGCTTCGG
GCACACCGTTTGCTAATTGAAAACCTTATCCTGAATCAGCAGGAGACTGATNCACTTTGG
TGGCTTTCTCGTTCTGATTGTATGACACACTAATCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|55624684|ref|XP_517896.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55624684|ref|XP_517896.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-876, gnl|bosTau2|chr16 (7508331-7507450)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-876, gnl|bosTau2|chr16 (7508331-7507450)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)