Ss1.1-Mixg-0001h09.5
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AGAAGACTTTGGTCGGAGGAAACCACCAGAGTGGCATCAGAGGTGATGCCAAGGGGCAGG
TGGCCCTGCTGTCCCGGACCAACGCCAACGTGTTTGATGAAGCCGTCAGGGTGACAGAAG
GGGAGGTGCCAGCTCGGATCCACCTGATCGGGGGGATCAAATCATTTGGATTGGACAGAA
TCGTTGACATCTGGACCCTCCTTCAGCCGGAGGAAGAACGCAGGAAAAAAAACCTCGTCA
TCAAGGACAAGTTCATCCGAAGGTGGGCGCACAGAGAGGGCTTCAGCGGCTTCAAGCGGT
ACGTGACGGCGGCCGAGGACAAGGAGCTGGAGGCGAAGATCGCGGTGGTGGAGAAGTACA
ACATCAGGATTCCGGAGTTGGTGCAGCGGATAGAGAGGTGCCACATCGAAGACCTGGACT
TTGCCGAGTACATCCTGGGCACAGTGCACAAGGCCAAGGGCCTGGAGTTCGACACTGTGC
ATGTCCTGGACGATTTTGTCAAAGTGCCTTGTGCCAGGCACAACCTCGCACAGCTGCCCC
ACTTCAGAGTCGAGTCCTTTTCTGAGGACGAGTGGAATTTACTGTACGTGGCGGTGACCC
GTGCCAGGAAGCGGCTCATCATGACCAAGTCCTTGGAGAACATTTTGACTCTGGCTGGGG
AGTACTTCCTGCAAGCAGAGCTGACGAGCGACGTGCTAAAGACGGGAGTGGTGCGCTGCT
GCGTGGGCCAGTGCAGCAATGCCATCCCCGTGGACACCGTGCTTACCATGCGCAAGCTGC
CCATCACCTACAGCAGCAGGAAGGAGAACAAGGGCGGGCACCTGTGCCACTCGTGCGCGG
AGCAGCGCATCGGGCCGCTGGCCTTCCTGACCGCCTCCCCCGAGCAGGTGCGCGCCATGG
ACCGCACGGTGGAGAACATAGTGCTGCCGCGGCACGAGGCCCTGCTCTTCCTCGTCTTCT
GAGGCGGCGGGGACACTGGGCGGACGCCTGCCTCTGCGGATGGCATGGGGGTGTCCGTCC
CGAGTCCAGACTCACTCACGGAGCATTTTCCCAGGAAGAAGAAGCCGACCAGAGCTGGAC
CTGCCGGGTCTCTGCCCCCGGAGGTGGCCAGACCCACTGCCCCTCCTCCACACACGGCAG
GCCTGGGGGGTCGGGGGTGTTCTTTTGATAAAAAACATTTTATGTATTTAAACTTTTATT
ACGAGGTTTCAATTAAACAGGCATTGTAGCACTGGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGAAGACTTTGGTCGGAGGAAACCACCAGAGTGGCATCAGAGGTGATGCCAAGGGGCAGG
TGGCCCTGCTGTCCCGGACCAACGCCAACGTGTTTGATGAAGCCGTCAGGGTGACAGAAG
GGGAGGTGCCAGCTCGGATCCACCTGATCGGGGGGATCAAATCATTTGGATTGGACAGAA
TCGTTGACATCTGGACCCTCCTTCAGCCGGAGGAAGAACGCAGGAAAAAAAACCTCGTCA
TCAAGGACAAGTTCATCCGAAGGTGGGCGCACAGAGAGGGCTTCAGCGGCTTCAAGCGGT
ACGTGACGGCGGCCGAGGACAAGGAGCTGGAGGCGAAGATCGCGGTGGTGGAGAAGTACA
ACATCAGGATTCCGGAGTTGGTGCAGCGGATAGAGAGGTGCCACATCGAAGACCTGGACT
TTGCCGAGTACATCCTGGGCACAGTGCACAAGGCCAAGGGCCTGGAGTTCGACACTGTGC
ATGTCCTGGACGATTTTGTCAAAGTGCCTTGTGCCAGGCACAACCTCGCACAGCTGCCCC
ACTTCAGAGTCGAGTCCTTTTCTGAGGACGAGTGGAATTTACTGTACGTGGCGGTGACCC
GTGCCAGGAAGCGGCTCATCATGACCAAGTCCTTGGAGAACATTTTGACTCTGGCTGGGG
AGTACTTCCTGCAAGCAGAGCTGACGAGCGACGTGCTAAAGACGGGAGTGGTGCGCTGCT
GCGTGGGCCAGTGCAGCAATGCCATCCCCGTGGACACCGTGCTTACCATGCGCAAGCTGC
CCATCACCTACAGCAGCAGGAAGGAGAACAAGGGCGGGCACCTGTGCCACTCGTGCGCGG
AGCAGCGCATCGGGCCGCTGGCCTTCCTGACCGCCTCCCCCGAGCAGGTGCGCGCCATGG
ACCGCACGGTGGAGAACATAGTGCTGCCGCGGCACGAGGCCCTGCTCTTCCTCGTCTTCT
GAGGCGGCGGGGACACTGGGCGGACGCCTGCCTCTGCGGATGGCATGGGGGTGTCCGTCC
CGAGTCCAGACTCACTCACGGAGCATTTTCCCAGGAAGAAGAAGCCGACCAGAGCTGGAC
CTGCCGGGTCTCTGCCCCCGGAGGTGGCCAGACCCACTGCCCCTCCTCCACACACGGCAG
GCCTGGGGGGTCGGGGGTGTTCTTTTGATAAAAAACATTTTATGTATTTAAACTTTTATT
ACGAGGTTTCAATTAAACAGGCATTGTAGCACTGGC
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gi|39645037|gb|AAH12762.2| |
Protein identifier
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gi|39645037|gb|AAH12762.2| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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31-153, gnl|bosTau2|chr13 (8812560-8812682) |
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31-153, gnl|Hg17|chr10 (6003417-6003539) |
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31-153, gnl|Mm7|chr2 (11690730-11690608) |
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230-424, gnl|bosTau2|chr13 (8813768-8813962) |
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230-424, gnl|Hg17|chr10 (6006281-6006475) |
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230-424, gnl|Mm7|chr2 (11688291-11688097) |
| |
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659-791, gnl|bosTau2|chr13 (8819984-8820116) |
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659-791, gnl|canFam2|chr2 (32893045-32892770) |
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659-791, gnl|dasNov1|scaffold_16960 (8364-8072) |
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659-791, gnl|echTel1|scaffold_301013 (11305-11579) |
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659-791, gnl|hg17|chr10 (6018383-6018654) |
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659-791, gnl|Hg17|chr10 (6018424-6018556) |
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659-791, gnl|loxAfr1|scaffold_20195 (29572-29280) |
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659-791, gnl|mm7|chr2 (11682957-11682688) |
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659-791, gnl|Mm7|chr2 (11682916-11682784) |
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659-791, gnl|monDom2|scaffold_31 (29140636-29140929) |
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659-791, gnl|oryCun1|scaffold_202774 (20971-20685) |
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659-791, gnl|panTro1|chr8 (6103050-6103321) |
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659-791, gnl|rn3|chr17 (77991964-77992228) |
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792-1236, gnl|bosTau2|chr13 (8820601-8821062) |
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792-1236, gnl|Hg17|chr10 (6019079-6019561) |
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792-1236, gnl|Mm7|chr2 (11682191-11681749) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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31-153, gnl|bosTau2|chr13 (8812560-8812682) |
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31-153, gnl|Hg17|chr10 (6003417-6003539) |
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31-153, gnl|Mm7|chr2 (11690730-11690608) |
| |
|
230-424, gnl|bosTau2|chr13 (8813768-8813962) |
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230-424, gnl|Hg17|chr10 (6006281-6006475) |
|
230-424, gnl|Mm7|chr2 (11688291-11688097) |
| |
|
659-791, gnl|bosTau2|chr13 (8819984-8820116) |
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659-791, gnl|canFam2|chr2 (32893045-32892770) |
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659-791, gnl|dasNov1|scaffold_16960 (8364-8072) |
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659-791, gnl|echTel1|scaffold_301013 (11305-11579) |
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659-791, gnl|hg17|chr10 (6018383-6018654) |
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659-791, gnl|Hg17|chr10 (6018424-6018556) |
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659-791, gnl|loxAfr1|scaffold_20195 (29572-29280) |
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659-791, gnl|mm7|chr2 (11682957-11682688) |
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659-791, gnl|Mm7|chr2 (11682916-11682784) |
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659-791, gnl|monDom2|scaffold_31 (29140636-29140929) |
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659-791, gnl|oryCun1|scaffold_202774 (20971-20685) |
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659-791, gnl|panTro1|chr8 (6103050-6103321) |
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659-791, gnl|rn3|chr17 (77991964-77992228) |
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792-1236, gnl|bosTau2|chr13 (8820601-8821062) |
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792-1236, gnl|Hg17|chr10 (6019079-6019561) |
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792-1236, gnl|Mm7|chr2 (11682191-11681749) |
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cly (0.241284) |
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pgl (0.236967) |
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eep (0.122564) |
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jca (0.11396) |
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cly (0.241284) |
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pgl (0.236967) |
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eep (0.122564) |
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jca (0.11396) |
